Pairwise Alignments

Query, 313 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 327 a.a., Monosaccharide-transporting ATPase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  100 bits (250), Expect = 4e-26
 Identities = 88/315 (27%), Positives = 146/315 (46%), Gaps = 16/315 (5%)

Query: 7   ALRLIIPAASLAFLLAAVFYMQPRAMSYTGMNLLFNLAVPIALATIAQMLIMSVNDLDLS 66
           A R  +  A++  LLA +    P  ++ + +  +FN   P+ L  I QM+++    +DLS
Sbjct: 7   ASRETLLIAAILLLLALIASRFPAFIAPSNLAHVFNDTSPLILLAIGQMIVILTRCIDLS 66

Query: 67  MGTFVSFCACVTATFLQTSP-LTGIAIFAGAIAVYAVLGA----VIHIRNLPSIVVTLGM 121
           +   ++    V +     +P L  + I A AI +  +LG     ++    +P IVVTLG 
Sbjct: 67  VAANLALTGMVVSMVNVAAPGLPIVVILAIAIGLGTLLGMFNGLLVWKLQIPPIVVTLGT 126

Query: 122 SFVWGGLAVLILPSPGGQA-------PAFIRTLMTAKPPFVPIAIVASILIAVVAHYIVM 174
             ++ G+  LI       +        AF R  +   P    IAI+A IL  +V    + 
Sbjct: 127 MTIFRGIIFLISDGKWVNSHEMSPAFKAFPRAELLGLPVLSWIAILAVILFTIV----MT 182

Query: 175 RSSFGVLMRGVGGNFRSVERSGWSVVGIRAATFALAGFFAVLSGIALVGLTTAADANIAL 234
           R++ G      GGN  +   +G  V   +   F ++G  A L+G   V     +  +IA 
Sbjct: 183 RTTLGRAFYAAGGNPHAATYAGIDVGKTQFWAFTISGALAGLTGYLWVSRFAVSYVDIAG 242

Query: 235 RYTLLSIAGVILGGGEFVGGRVSPIGAVIGALTLTLAGSFLSFMRISPDWQIGAQGAILI 294
            + L  +A  ++GG   +GG  +  GA++GAL L +  + L  + ISP WQ+   G  +I
Sbjct: 243 GFELDVVAACVIGGVSIMGGVGTVGGALLGALFLGIIKNALPVVDISPFWQLAISGGAII 302

Query: 295 IVLALRILLNRLEKR 309
           I +AL    NR + R
Sbjct: 303 IAVALNAQANRKKGR 317