Pairwise Alignments

Query, 313 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 320 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 14/307 (4%)

Query: 10  LIIPAASLAFLLAAVFYMQPRAMSYTGMNLLFNLAVPIALATIA--QMLIMSVNDLDLSM 67
           L++P   +  L        P+  +Y G+     +A P+ LA IA   + I     +DLS+
Sbjct: 11  LLVPFGLVLVLGVIAAVRAPQTFTYVGLAGALLVAAPLILAAIAITPIAIAGRGGVDLSI 70

Query: 68  GTFVSFCACVTATFLQTSPLT-GIAIFAGAI----AVYAVLGA-VIHIRNLPSIVVTLGM 121
           G  + F       +L  + +T  + +FA AI    A  A+L A +IH+R  P I+ +L  
Sbjct: 71  GPLIGFVNVTIVVWLTGNGITHPVLVFAYAILAACAWQALLAALIIHVRISP-IIASLAG 129

Query: 122 SFVWGGLAVLILPSPGGQAPAFIRTLMTAKPPFVPIAIVASILIAVVAHYIVMRSSFGVL 181
             +  G+ ++IL  PGG AP ++           P+  +  ++ A V   +  R+     
Sbjct: 130 FMILSGVNLVILSRPGGFAPEWLGNWGWGTELLSPVLYI--LVAACVIWALFSRTPLFQH 187

Query: 182 MRGVGGNFRSVERSGWSVVGIRAATFALAGFFAVLSGIALVGLTTAADANIALRYTLLSI 241
           +R +G + R+   SG  +V  R A   LAG FA L+ + L GL  + D       TL +I
Sbjct: 188 IRLMGADERTAYTSGVDIVKARYAAHLLAGVFAGLAALCLTGLIGSGDPTQGNTLTLQAI 247

Query: 242 AGVILGGGEFVGGRVSPIGAVIGALTLTLAGSFLS---FMRISPDWQIGAQGAILIIVLA 298
             ++LGG    GG+    G+++GAL + L    LS   F  IS        G +L+I L 
Sbjct: 248 TALVLGGTSLSGGKGGITGSILGALAMYLVFVVLSSFNFGAISGFMTQLFYGLMLVISLM 307

Query: 299 LRILLNR 305
           L ++ +R
Sbjct: 308 LALVTSR 314