Pairwise Alignments

Query, 315 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

 Score = 93.6 bits (231), Expect = 6e-24
 Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 25/294 (8%)

Query: 43  LTFAAFSVIVGIGQM-FVITLGPGNIDLCVPATMTLSGTLALKFMDVSDSL--------- 92
           LT ++  VI+ +G    ++T G    DL     + L+  ++   +   D++         
Sbjct: 47  LTQSSVRVIIALGVAGLIVTQGT---DLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGE 103

Query: 93  --ILPGLLIAILIGIAIGIGNYALIKLLRIPPIIATLSMSFIVQSIAIWSNRGLRIKP-- 148
             IL  ++   LIG  IG+ N  ++  L++ P IATL    IV  I       +   P  
Sbjct: 104 IPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIA 163

Query: 149 --PETLATFAIS----SSFGIPNVALVALLLSVIAWLLLDRTFYGRWIAAIGQSTFAARM 202
              E   TF         F    +   A++  +  W+L ++T +G+ I A+G +  AA++
Sbjct: 164 GFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFMWVLWNKTVFGKNIFAVGGNPEAAKV 223

Query: 203 TGIPVDGTRFVTYVLCAVLAAIAGYLLASFSGGAALNMGSEYLLMSIAVVVIGGTAVSGG 262
           +G+ V  T    Y L  V  A  G L A   G A  N+G  Y L +IA  V+GG + +GG
Sbjct: 224 SGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGG 283

Query: 263 DSNVPGIWGASLFMFLVVSMLNTY-GFGAGIRLILTGLIIISVILLASGRKATR 315
             ++ G+    + +F V++   TY G     + I+ G III  + L S + A +
Sbjct: 284 VGSIAGV-VTGVLIFTVINYGMTYIGVSPYWQYIIKGSIIIFAVALDSMKYANK 336