Pairwise Alignments

Query, 315 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  106 bits (264), Expect = 8e-28
 Identities = 88/304 (28%), Positives = 144/304 (47%), Gaps = 20/304 (6%)

Query: 17  AATAAVWIITVLFTGGASSFGLSHAALTFAAFSV---IVGIGQMFVITLGPGNIDLCVPA 73
           A   A+W+         S FG S       A  +   I  +GQMFV+ +G   +DL + +
Sbjct: 29  AIAMALWLAAT-----TSQFGQSSNLANLVAQGMPLLITAVGQMFVVLVG--GLDLSIGS 81

Query: 74  TMTLSGTLALKFMDVSDSLILPGLLIAILIGIAIGIGNYALIKLLRIPPIIATLSMSFIV 133
            ++   T A+  +D+   + +P + +  L G+ IG  N   +  L + PI+ATLSM +IV
Sbjct: 82  VVSF--TTAILALDLPGFVTIPAVFV--LAGL-IGATNGYCVTRLSVHPIVATLSMQYIV 136

Query: 134 QSIAIWSNRGLRIKPPETLATFAISSSFGIPNVALVALLLSVIAWLLLDRTFYGRWIAAI 193
             I            P+++      S FGIP      ++  ++AW LL  + YG  + AI
Sbjct: 137 LGITRVLRPVSGGAVPDSVRWMVEGSLFGIPLPVFWGIVTMLVAWKLLYGSRYGLHLFAI 196

Query: 194 GQ-----STFAARMTGIPVDGTRFVTYVLCAVLAAIAGYLLASFSGGAALNMGSEYLLMS 248
           G      S  AAR  GIP +    + YV+C + AA+AG  LA        N+G    L +
Sbjct: 197 GGGVASGSADAARNFGIPANRNILLAYVICTLFAALAGVFLAGRIVSGDPNVGLLMELDA 256

Query: 249 IAVVVIGGTAVSGGDSNVPGIWGASLFMFLVVSMLNTYGFGAGIRLILTGLIIISVILLA 308
           I  V IGGT +SGG  ++ G       + L+ + +N       ++  + G+++++V+ L 
Sbjct: 257 ITAVAIGGTQLSGGVGSLHGTVIGVAALALLSNGMNLLNVTPFVQTAIKGILLMAVVALQ 316

Query: 309 SGRK 312
           S +K
Sbjct: 317 SRKK 320