Pairwise Alignments

Query, 315 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 327 a.a., Monosaccharide-transporting ATPase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  104 bits (259), Expect = 3e-27
 Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 17/273 (6%)

Query: 50  VIVGIGQMFVITLGPGNIDLCVPATMTLSGTLALKFMDVSDSLILPGLLIAILIGIAIGI 109
           +++ IGQM VI      IDL V A + L+G + +  ++V+     PGL I +++ IAIG+
Sbjct: 48  ILLAIGQMIVILTRC--IDLSVAANLALTG-MVVSMVNVA----APGLPIVVILAIAIGL 100

Query: 110 G------NYALIKLLRIPPIIATLSMSFIVQSIAIWSNRGLRIKPPE---TLATFAISSS 160
           G      N  L+  L+IPPI+ TL    I + I    + G  +   E       F  +  
Sbjct: 101 GTLLGMFNGLLVWKLQIPPIVVTLGTMTIFRGIIFLISDGKWVNSHEMSPAFKAFPRAEL 160

Query: 161 FGIPNVALVALLLSVIAWLLLDRTFYGRWIAAIGQSTFAARMTGIPVDGTRFVTYVLCAV 220
            G+P ++ +A+L  ++  +++ RT  GR   A G +  AA   GI V  T+F  + +   
Sbjct: 161 LGLPVLSWIAILAVILFTIVMTRTTLGRAFYAAGGNPHAATYAGIDVGKTQFWAFTISGA 220

Query: 221 LAAIAGYLLASFSGGAALNMGSEYLLMSIAVVVIGGTAVSGGDSNVPGIWGASLFMFLVV 280
           LA + GYL  S    + +++   + L  +A  VIGG ++ GG   V G    +LF+ ++ 
Sbjct: 221 LAGLTGYLWVSRFAVSYVDIAGGFELDVVAACVIGGVSIMGGVGTVGGALLGALFLGIIK 280

Query: 281 SMLNTYGFGAGIRLILT-GLIIISVILLASGRK 312
           + L         +L ++ G III+V L A   +
Sbjct: 281 NALPVVDISPFWQLAISGGAIIIAVALNAQANR 313