Pairwise Alignments

Query, 654 a.a., iron-hydroxamate transporter permease subunit from Agrobacterium fabrum C58

Subject, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis JJ

 Score =  115 bits (287), Expect = 4e-30
 Identities = 86/288 (29%), Positives = 139/288 (48%), Gaps = 14/288 (4%)

Query: 376 ASDLQTLLPFRWPRLVAAIAAGGLLAMAGALLQRLTGNPMASPEVIGVSGGAGLGFAAAI 435
           AS    +   R PR+ AAI  G  L+++GA++Q +  NP+ASP  +G+S GA  G   AI
Sbjct: 56  ASSNLVIWNIRLPRIFAAILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAI 115

Query: 436 TIFPAAGL-----------FELFCGAGIGSAAVMILVLFFAVRRHLAPEKILLAGIAVSS 484
                 G            + +   A +GS   +  VL  A  + L+PE ++LAG+A+SS
Sbjct: 116 ITLGIGGAESTGHIAINNPYSITIFAFLGSLLGVCAVLVLAKLKGLSPEAMVLAGVAISS 175

Query: 485 LCSAVLSALLAIG-DQRAWQILAWLSGSGSTATPASAIFLSILSVVLLVAALSVTRW-LT 542
           L +A  + +     D +   ++ W  G            +++++ V L+  +   RW   
Sbjct: 176 LFTAATTLIQYFADDMQLAAMVYWSFGDLGRPLWPEVKIMALVAFVSLIYFIH-KRWDYN 234

Query: 543 ILPLGRDVPLSLGLPLSAARIAVIAVAGIATGAASLLVGPLSFVGLMAPHIALRAGFTTP 602
            L  G +   SLG+     R++ + VA + T      +G + FVGL+ PHI         
Sbjct: 235 ALESGEETAKSLGVNTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDY 294

Query: 603 RDHLLASFLFGAVLMALSDLGARTVTFPYELPLGLFAALAGAPYLIWL 650
           R  +    +FGAVL+ L+D  ART+  P  LP+G+  +  GAP  ++L
Sbjct: 295 RYLIPLCSIFGAVLVLLADTIARTIISPIILPVGILTSFLGAPMFLYL 342



 Score =  107 bits (266), Expect = 1e-27
 Identities = 78/284 (27%), Positives = 139/284 (48%), Gaps = 18/284 (6%)

Query: 56  LPRVAVAILAGAMLGLSGALFQQLLRNPIADPSTLGISAGAQLAIVIATLFF---PSVLD 112
           LPR+  AIL G  L +SGA+ Q +LRNP+A P T+GIS GA     +A +      +   
Sbjct: 67  LPRIFAAILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAEST 126

Query: 113 GNRA--------LVALAGAAAAAGVVFLLGWRRSFEPVTMVVSGLLV-GITAASVSAALT 163
           G+ A        + A  G+      V +L   +   P  MV++G+ +  +  A+ +    
Sbjct: 127 GHIAINNPYSITIFAFLGSLLGVCAVLVLAKLKGLSPEAMVLAGVAISSLFTAATTLIQY 186

Query: 164 LAQGEYLMSLVVWNGGSLSQQDWSNAVMLAFQLLAGLALTGLLIR--PLTVLGLGDSGAR 221
            A    L ++V W+ G L +  W    ++A  L+A ++L   + +      L  G+  A+
Sbjct: 187 FADDMQLAAMVYWSFGDLGRPLWPEVKIMA--LVAFVSLIYFIHKRWDYNALESGEETAK 244

Query: 222 SLGVSLFSIRLAVAAVAVMLAAFVASAVGLVSFIGLAAPALTRALGVRRSSSVLLVSPLL 281
           SLGV+   IRL+   VA ++ +   + +G++ F+GL  P + R         ++ +  + 
Sbjct: 245 SLGVNTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSIF 304

Query: 282 GGLLLWFCDGLVQLLASTTAEVFPTGAVTALIGGPLLLWLLPKI 325
           G +L+   D + + + S    + P G +T+ +G P+ L+LL K+
Sbjct: 305 GAVLVLLADTIARTIISPI--ILPVGILTSFLGAPMFLYLLTKM 346