Pairwise Alignments

Query, 328 a.a., 3-oxoacyl-ACP synthase from Agrobacterium fabrum C58

Subject, 341 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase III (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 76.6 bits (187), Expect = 8e-19
 Identities = 87/337 (25%), Positives = 140/337 (41%), Gaps = 34/337 (10%)

Query: 17  ARCVDNAEIEASLGLEAGWIERRTGIRSRYWA-----------------EAGDTLSGLAE 59
           A  ++   +EA       +IE+ +GI+ RY                    + D LS  AE
Sbjct: 7   AGLIEQGHVEALSYSSCEFIEKASGIKHRYVMVKEGILDPEVMMPLIPERSSDELSMQAE 66

Query: 60  ---RAGRMALEDAKINADDIALTLLATSTPDHLLPPSAPLLAHRLGLTRSGAIDLAGACS 116
               A  MAL+ A++ A+ I L ++A +      P  A  +   LG TR    D+  ACS
Sbjct: 67  IGVEAALMALKQAELKAEQIDLVIVACAYTQRAYPAMAIEIQRALG-TRGYGYDMQVACS 125

Query: 117 GFLYALTLADGFVRTYGRA-VLVVAANILSRRINPAERASAVLFADAAGAVVLTP----C 171
              +A+  A   + T   + VLV+   I S ++N  +R S  +F D A AVVL       
Sbjct: 126 SATFAIVAAANAIATGSASRVLVINPEICSAQVNYRDRDSHFIFGDVATAVVLEEQSLVA 185

Query: 172 PEVKRGVLSADLVADGSGYDLIQIAAGGSSQPFSAGMIAEDALMTMRDGREVFSRAVALM 231
           P     +LS+    D S              P SA    +   +  + GR+VF   + ++
Sbjct: 186 PNKGFTILSSRCFTDYSNNIRSNFGFLNRCDPSSAHQADK---LFHQQGRKVFKELLPMI 242

Query: 232 TNTSQRVLHEAELTAADISRFVPHQANARMSDAVCGNL---GIEREKTVRTIGSFGNSSA 288
                  L E  LT     R   HQAN  M+  V   L    +  E+    +  + N+++
Sbjct: 243 YQHLDEHLAEQSLTPQSFKRLWLHQANINMNLFVVKKLLGDEVAPEQAPVVLDEYANTAS 302

Query: 289 ATIPLSLSITNAERPLAGGETLLLTAAGAGMTGGAVV 325
           A   ++    +A+     G+  LL++ GAG + G+V+
Sbjct: 303 AGSVIAFHQYSAD--FNAGDLGLLSSFGAGYSIGSVI 337