Pairwise Alignments

Query, 532 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 412 a.a., MFS general substrate transporter from Pseudomonas fluorescens FW300-N2E2

 Score =  110 bits (276), Expect = 8e-29
 Identities = 96/377 (25%), Positives = 155/377 (41%), Gaps = 4/377 (1%)

Query: 19  FAVLWAATVLGNTGSFMRDVASSWLMTDLSASPAAVALVQAAGTLPIFLLAIPAGVLTDI 78
           F   W A +   +G  M  VA  W +  L+ +   + LV      P  L  +  G + D 
Sbjct: 15  FIAFWLARIFTASGFQMLTVAIGWNLYQLTGNVLDLGLVGLVEFAPRVLFMLHTGHVADR 74

Query: 79  LDRRKFLIAVQLLLASVSVTLMVLAHTGMLSVSALIGLTFLGGIGAALMGPTWQAIVPEL 138
            DRRK     Q L A +++ L++ + T  ++   +  L FL G   +   PT QA++P +
Sbjct: 75  YDRRKVAAICQTLQAMIALALVIGSATDNVTREMIFILAFLLGAARSFEMPTTQALLPSI 134

Query: 139 VKREDIKSAVALNSLGINIARSIGPAVGGILLAAFGAAFTYGADVASYFFVIAALLWWPR 198
           V       AVA        A  + PA+GG LL AFG+ + YG  V  Y      +L  P 
Sbjct: 135 VPAALFPRAVAAAQSAQQSATIVAPALGG-LLYAFGSVWVYGPTVLLYIIACCLMLNLPA 193

Query: 199 AKNANNALQENFFGAFRAGLRYTRASRPLHVVLLRAAIFFAFASAVWALLPLVARQLLGG 258
            +   N  +     +  AG+R+ R SRP  +  +   +F        ALLP+ A+ +L  
Sbjct: 194 RQTPLNKGKAT-LDSLLAGIRFIR-SRPDILGAISLDLFAVLLGGATALLPVFAKDILLT 251

Query: 259 DASFYGILLGAVGAGAIAGALVMPKLRARFDADGLLLGAAIVTALVMAGLSFAPPKWLAI 318
                G+L  A   GA+  +L + +         ++  A  V  +       +   W ++
Sbjct: 252 GPWGLGLLRSAPAVGALLMSLWLARFAVERKVGRVMFTAVGVFGVATIAFGLSTSFWFSL 311

Query: 319 IILLFLGGAWITALTTLNGAAQAILPNWVRGRGLAVYLTVFNGAMTAGSIGWGAVGEAAG 378
            +L+ LG A + ++       Q   P+ +RGR  AV       +   G    G      G
Sbjct: 312 AVLVVLGAADMISMVIRASFVQLETPDEMRGRVSAVNGLFIGASNQLGEFESGLTAHWFG 371

Query: 379 -VPGTLLIGAAGLFIAG 394
            VP  ++ G   L + G
Sbjct: 372 TVPAVVMGGVGTLLVTG 388



 Score = 25.4 bits (54), Expect = 0.004
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 119 LGGIGAALMGPTWQAIVPELVKREDIKSAV 148
           +GG+G  L+  TW  + P L  R+ +   V
Sbjct: 378 MGGVGTLLVTGTWIKLFPTLANRDRMHEPV 407