Pairwise Alignments

Query, 257 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (282), Expect = 5e-30
 Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 4/203 (1%)

Query: 56  NSTFITVTSTLIMLIVNSMAAFALSKYEFKGRGVVLALVVGTLMIPQTVVLVPLFLITSQ 115
           NS  + +   +  ++++ MAA+AL  +          L+  TL++P  V ++P + + S 
Sbjct: 76  NSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRIIPSYEVVSN 135

Query: 116 LGLINSLWGVIIPGAATPTGVFLLRQYMLTIPDEILDAARMDKASEWKIYWRIILPLSAP 175
           LG++NS  G+++P  A+ T  F  RQ+  TIPDE+L+AA++D A   + +  I+ PLS  
Sbjct: 136 LGMLNSYTGLVLPLIASATATFFFRQFFKTIPDELLEAAQLDNAGPIRFFIDILFPLSKT 195

Query: 176 ALAVLAILAIMWRWNDFLWPLIVLTRNDNFTLQLA----LNSFQGEMTTEWSNLLAMTVL 231
            +A + I+  +  WN +LWP+++ T     T+ +     LN+        +    AM +L
Sbjct: 196 MMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLPRYDYAFAMVIL 255

Query: 232 TLAPIALVFMFLQKYIATGIAST 254
            + P  LV +  Q++   G+  +
Sbjct: 256 AMLPPVLVVVIFQRWFVKGLVES 278