Pairwise Alignments

Query, 257 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 299 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  139 bits (351), Expect = 5e-38
 Identities = 72/224 (32%), Positives = 128/224 (57%), Gaps = 2/224 (0%)

Query: 36  LATENYTELFQRFNFPLYFWNSTFITVTSTLIMLIVNSMAAFALSKYEFKGRGVVLALVV 95
           L  +N+ + +   ++   + N+ F +  + L+ L+  + A +  + +EF+G+  +  L++
Sbjct: 76  LTLQNFRDAWDSADWLRLYANTLFFSFGTFLVQLVTITTAGYVFAYHEFRGKQTLFYLLL 135

Query: 96  GTLMIPQTVVLVPLFLITSQLGLINSLWGVIIPGAATPTGVFLLRQYMLTIPDEILDAAR 155
             LMI   +++VP  +I  Q GL+N+L GV++P  A+  GVFL+RQ  L+IP EI +AA 
Sbjct: 136 IQLMIMPVIMMVPNMMILKQFGLLNTLTGVMMPYFASAFGVFLMRQAFLSIPREIEEAAL 195

Query: 156 MDKASEWKIYWRIILPLSAPALAVLAILAIMWRWNDFLWPLIVLTRNDNFTLQLALNSFQ 215
           M+    W++ +R+++P+S PA+   A ++I + WN++LWPL+VL   D   L + L SF 
Sbjct: 196 MEGCRWWQVVFRVLIPMSWPAILAFATVSITYHWNEYLWPLMVLNDPDKQVLTVGLVSFA 255

Query: 216 --GEMTTEWSNLLAMTVLTLAPIALVFMFLQKYIATGIASTGGK 257
              E   +W  + A T++   P+ L F+  QK        +G K
Sbjct: 256 MGAESGGQWGLITAGTLMVCLPLMLAFIIFQKQFLKSFGFSGIK 299