Pairwise Alignments

Query, 257 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 278 a.a., carbohydrate ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  157 bits (396), Expect = 3e-43
 Identities = 77/220 (35%), Positives = 127/220 (57%), Gaps = 1/220 (0%)

Query: 39  ENYTELFQRFNFPLYFWNSTFITVTSTLIMLIVNSMAAFALSKYEFKGRGVVLALVVGTL 98
           EN    F + +   +  N   +TV      +++   AA+AL+K  F GR  + ALV+  +
Sbjct: 59  ENLRIAFGKADLGRFLLNGVIVTVAIFTCQVLIALPAAYALAKLRFVGRKALFALVLFGI 118

Query: 99  MIPQTVVLVPLFLITSQLGLINSLWGVIIPGAATPTGVFLLRQYMLTIPDEILDAARMDK 158
           +IP     +P+FL+  QLG ++S   +++P   +  G+FL+RQ+ +T+PD++LDAARMD 
Sbjct: 119 LIPPQATAIPVFLLLHQLGALDSYAALVLPFTISVFGIFLMRQFFMTVPDDLLDAARMDG 178

Query: 159 ASEWKIYWRIILPLSAPALAVLAILAIMWRWNDFLWPLIVLTRNDNFTLQLALNSFQ-GE 217
            SE+ I WR++LP + PA+    I +++  WND+ WPLIVL     +T  LA+  F+  E
Sbjct: 179 MSEFAIVWRVMLPTAIPAVTAFGIFSVVAHWNDYFWPLIVLNSQQYYTPPLAVAHFRNAE 238

Query: 218 MTTEWSNLLAMTVLTLAPIALVFMFLQKYIATGIASTGGK 257
             T +  L+A  ++ + P+ + F+  Q+    GI  TG K
Sbjct: 239 AGTSYGPLMAAAIVIITPLVVAFLLAQRRFIEGITLTGLK 278