Pairwise Alignments

Query, 322 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  132 bits (332), Expect = 1e-35
 Identities = 90/295 (30%), Positives = 147/295 (49%), Gaps = 20/295 (6%)

Query: 30  WVFLTPNLILFAVFAFLPIALNMAYSVTGSEHILLSERPSVGGENFSVLLSCQNYLDPNS 89
           W+F+ P L L  +F   PIA ++  S      + L          F+ ++   N  DP  
Sbjct: 17  WLFVAPALGLITLFMVYPIAWSLWMSFQSGRGMTLKFA------GFANIVRLWN--DP-- 66

Query: 90  CQRDLFWRSVWNTLFFVVLQVGFMVGFSLITAVVLNRD-IRARGFFRAVFFFPVLLSPVV 148
               +F +++ NT+ + V+QV  M+  +LI A +LN   +  RG FR   F P + S V 
Sbjct: 67  ----VFIKALTNTMTYFVVQVPIMILLALILASLLNNPRLVGRGVFRTAIFLPCVSSLVA 122

Query: 149 VALIWKWILQRFGVLNAAMEGLGLGS--VDWLLEANLAFGWSVFLSVWAHMGFYTLILLA 206
            ++++K +    G++N+ ++ +GL +  + WL     A    +    W   G+  +  LA
Sbjct: 123 YSVLFKGMFATDGIVNSTLQAIGLAASPIPWLTHPFWAKVLVILAITWRWTGYNMIFYLA 182

Query: 207 GLQAIPRDVYEAAQLDKASPWRIFRRITLPLLAPTMLVVLVLSLIKGVQTFDEVFAFT-- 264
            LQ I + +YE A++D    W     +T+PLL P +L   V+S I  +Q FDEV+  T  
Sbjct: 183 ALQNIDKSIYEVARIDGVPAWARLTHLTIPLLKPVILFTTVISTIGTLQLFDEVYNLTEG 242

Query: 265 GGGPGSATTFIIQFIYQTGFAGTPRNFGLAAAASLLLAVVLVVLTALQFRANRSK 319
            GGP +AT  +  +IY   F   P N G AA  S ++ V++ +L  +QF A R +
Sbjct: 243 KGGPSNATLTLSLYIYNLTFRFMP-NLGYAATVSYVIVVLVALLAFVQFFAARER 296