Pairwise Alignments

Query, 322 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 293 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  121 bits (304), Expect = 2e-32
 Identities = 81/298 (27%), Positives = 138/298 (46%), Gaps = 25/298 (8%)

Query: 29  AWVFLTPNLILFAVFAFLPIALNMAYSVTGSEHILLSERPS-----VGGENFSVLLSCQN 83
           AW+ L P +     F  +P      +S       +L  +       VG E++  L     
Sbjct: 12  AWLLLLPAMAFIVAFTHVPAVNTFIHS------FMLDGKGGAPATFVGLEHYMYLF---- 61

Query: 84  YLDPNSCQRDLFWRSVWNTLFFVVLQVGFMVGFSLITAVVLNRDIRARGFFRAVFFFPVL 143
                  + ++F +++ N L F    +   +G +++ A ++N  +  +   R  +F P +
Sbjct: 62  -------EDEVFRKALVNNLLFASGTIPLSIGLAMLMAFMVNAGLAGQSVLRLCYFVPTV 114

Query: 144 LSPVVVALIWKWILQ-RFGVLNAAMEGLGLGSVDWLLEANLAFGWSVFLSVWAHMGFYTL 202
           L  + VA IW +     +G+L      LG   V+WL   + A    + ++VW   GF+ +
Sbjct: 115 LPMIAVANIWLFFFTPEYGLLEQVRGALGFSGVNWLGNESTALPCVIAVAVWKDAGFFMI 174

Query: 203 ILLAGLQAIPRDVYEAAQLDKASPWRIFRRITLPLLAPTMLVVLVLSLIKGVQTFDEVFA 262
             LA LQ I   + EAA L+ AS    +RR+ +PLL PT L VLV + I   +  D +F 
Sbjct: 175 FYLAALQQISPSLGEAAMLEGASRLYFYRRVVIPLLMPTTLFVLVNATINAFRMVDHLFV 234

Query: 263 FTGGGPGSATTFIIQFIYQTGFAGTPRNFGLAAAASLLLAVVLVVLTALQFRANRSKV 320
            T GGP +A++ ++ +IY+  F      +G  AA +++L   L + +  QF     KV
Sbjct: 235 LTQGGPNNASSLLLYYIYEVSFKYWDTGYG--AALTMVLLAFLGLASIGQFGFFERKV 290