Pairwise Alignments

Query, 363 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  250 bits (638), Expect = 5e-71
 Identities = 132/284 (46%), Positives = 193/284 (67%), Gaps = 3/284 (1%)

Query: 9   NEVLVDCQNVWKIFGARASTAVKAVARGGLSKKQVLEDFDCVVGVCDASLQVHRGEIFCI 68
           +E ++    ++KIFG +   A   + + G S++++ E    VVG+ + +  V RGEIF I
Sbjct: 2   DEPIIQVTELYKIFGKKPEKAYPLI-KEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVI 60

Query: 69  MGLSGSGKSTLIRLLNRLIEPSLGKITVK-GKDIARLNAAELRELRARNIAMVFQSVALL 127
           MGLSGSGKSTLIR +NRLI+P+ GKI ++ G DI++++  EL E+R +   MVFQ   LL
Sbjct: 61  MGLSGSGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKELLEIRRKYFGMVFQKFGLL 120

Query: 128 PYRTVLENAGFSLEVRGVAKDERNRIARAALEKVGLADWTSRYPHELSGGMQQRVGLARA 187
           P R+VLEN    LE++G+  +ER   +  AL  VGL  W      ELSGGMQQRVGLAR 
Sbjct: 121 PNRSVLENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARG 180

Query: 188 LAADPEIILMDEPFSALDPLIRRQLQDEFRQLTKSLGKSAVFITHDLEEAIRIGDRIAIM 247
           LA +PEI+LMDEPFSALDPLIR ++Q+   ++ K + K+ +FITHDL EAI++GDRI I+
Sbjct: 181 LAVNPEILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMIL 240

Query: 248 -KDGVIVQVGTAEEIVTKPADDYVSDFVAGISRIHLVKAHTVMQ 290
            ++G +VQ+   EEI+  P +D+V  FV  + +  +++A ++++
Sbjct: 241 NEEGSLVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLVK 284