Pairwise Alignments

Query, 282 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

 Score =  226 bits (577), Expect = 3e-64
 Identities = 108/250 (43%), Positives = 166/250 (66%)

Query: 23  DNGEGLFDFVSRLLEGSYDGILWLLQLAPPVVIALIAALLGWRLINLAAGILAGVALLFC 82
           DN  G FD +S +++   D   +LL    P ++ L+ A++ W+ +NL + + +   L+  
Sbjct: 22  DNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVWKTVNLKSMLYSVFFLVII 81

Query: 83  ATMGLWAETMSTLALVTTATILALLVGIPLGIIAGFTKSLDRVLEPILDLIQTMPPYIYL 142
             MGLW  +M TL+L+ T+T++ALL+GIPLGI+   +K +  +L+P+LD++QT+P   YL
Sbjct: 82  VMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAYL 141

Query: 143 LPAIALLGYGPATALIATFIVAMPPAIRLTSLGIRMTPREFIELGHASGLTPWQMFMKIR 202
           +PA+   G G    +IAT I AMPPAI+LT+LGI     E IE+G A G T WQ+  KI 
Sbjct: 142 IPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKIE 201

Query: 203 LPFAIPSVMAGINQSLMMAFGMVVIAGIVGSGGLGETIYGAVRTLDIATSINAAIAIVIL 262
           LP A+PS+M G+NQ++M++F MVVIAG +GSGGLGE I   ++   +A ++ A IA+  L
Sbjct: 202 LPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFL 261

Query: 263 TMVLDRLTQS 272
            ++ DR+T++
Sbjct: 262 AVIFDRITRN 271