Pairwise Alignments

Query, 431 a.a., nitrate ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

 Score =  183 bits (465), Expect = 1e-50
 Identities = 128/419 (30%), Positives = 196/419 (46%), Gaps = 30/419 (7%)

Query: 10  SKGEATQMRDAPALVGSDRQKILRAGFIPLVDASVLIAAAEFGFADREGLILDLVKDVSW 69
           +K  A     APA+  S +QK +R GF+P  D + L  A E G     GL ++L   ++W
Sbjct: 260 AKRRAKAAAPAPAVAAS-QQKTVRLGFLPGNDCAPLAIAQELGLFQDLGLSVELQSFLTW 318

Query: 70  ANVRDRLAFRQFDIAHMLSPMPVASMLGLGSN-PSPTITPFSLGRGGNAITLSTR-LFAR 127
             + D +   Q + A M++  P+A  +GLG + P    TP ++ R G AI LS R L A 
Sbjct: 319 EALEDSIRLGQLEGALMMAAQPLAMTMGLGGHRPFAIATPLTVSRNGGAIALSRRYLNAG 378

Query: 128 MKALTGLSETAGALENARALKLVLDDMRARGEAPPTLGMTYPFSSHNYEFRYWLAAGGIH 187
           +++L  L +   A    + L+L + D               P +      RYWLA+ G++
Sbjct: 379 VRSLEDLCQFLAA--TPQRLRLAIPD---------------PIAMPALLLRYWLASAGLN 421

Query: 188 PDHDVKLVVVPPPMTSDALAAGAIDGFCVGAPWNIVAAERGVGRIVAAKQDLWPSAPEKV 247
           P+ DV+LV + P    +AL AG IDGF  G     +A + G   ++A   D+W   PEKV
Sbjct: 422 PEQDVELVGMSPYEMVEALKAGDIDGFAAGEMRIALAVQAGAAYVLATDLDIWAGHPEKV 481

Query: 248 IGMRPEWAESQQETVGRLLTALDAAASWCDLADNHDALSGALADPRYIG-APQSIIRRVL 306
           +G+   W +   ET   L +AL  A   CD     D +   L  P+Y+G A  ++++R  
Sbjct: 482 LGLPEAWLQVNPETAIALCSALLKAGELCDDPRQRDRIVEVLQQPQYLGSAAGTVLQRYF 541

Query: 307 AGEFSIDSQGNRRVIEKYFTFHGDHANYPRQSQSLWIYSQMIRWGQAELSETGVNAALSA 366
             +F +  +  +  I ++  FH D ANYP   +  W+ +Q+ RWG   L +         
Sbjct: 542 --DFGLGDEPTQ--ILRFNQFHVDQANYPNPLEGTWLLTQLCRWGLTPLPKNRQELLDRV 597

Query: 367 YRPDIYRAALGDGKAPGDADIRIEGQDEGDRFVDGFVFDPADIAGYVNSFAVRTSVPVS 425
           YR DIY AA+     P      I     G    D   FDP     Y+  F ++  + V+
Sbjct: 598 YRRDIYEAAIAAVGFP-----LITPSQRGFELFDAVPFDPDSPLRYLEQFEIKAPIQVA 651