Pairwise Alignments

Query, 297 a.a., nitrate ABC transporter permease from Agrobacterium fabrum C58

Subject, 263 a.a., nitrate transport permease from Synechococcus elongatus PCC 7942

 Score =  201 bits (512), Expect = 1e-56
 Identities = 101/234 (43%), Positives = 149/234 (63%), Gaps = 5/234 (2%)

Query: 52  VLAVL--LGVWQLLCSAP--GSSLPPPSQVFEESYDLIVSPFFHNGSQDIGLGLRVLVSL 107
           +L+VL  L +WQ+  ++   G + P   +  ++ +  +  PFF NG  D+G+G  +L+SL
Sbjct: 16  ILSVLAFLAIWQIAAASGFLGKTFPGSLRTLQDLFGWLSDPFFDNGPNDLGIGWNLLISL 75

Query: 108 ERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRTVPPLAWLPLSLAAFQDSNPS 167
            RVA G+ LA +  I LG  IG S  A     P  Q+L+ V PLAWLP+ L  F+DS  +
Sbjct: 76  RRVAIGYLLATVVAIPLGIAIGMSALASSIFSPFVQLLKPVSPLAWLPIGLFLFRDSELT 135

Query: 168 AIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQLEFFFKIMLPSAAPYIFTGLR 227
            +FVI I+S+WP +INTA GV N+  D+  V++ L  ++     K++LP+A P I  G+R
Sbjct: 136 GVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRTILKVILPAALPSIIAGMR 195

Query: 228 IGIGLSWLAIVAAEMLTGGVGIGFFIWDAWNSSRLPDIIVALAYIGVVGFMLDK 281
           I +G++WL IVAAEML  G GIG+FIW+ WN+  LP+I  A+  IG+VG +LD+
Sbjct: 196 ISMGIAWLVIVAAEMLL-GTGIGYFIWNEWNNLSLPNIFSAIIIIGIVGILLDQ 248