Pairwise Alignments

Query, 297 a.a., nitrate ABC transporter permease from Agrobacterium fabrum C58

Subject, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  133 bits (334), Expect = 5e-36
 Identities = 71/201 (35%), Positives = 121/201 (60%), Gaps = 4/201 (1%)

Query: 85  IVSPFFHNGSQDIGLGLRV---LVSLERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPI 141
           ++S   + G   +G G  +   +VS++RV  GF +A    I LG ++G         D  
Sbjct: 36  VISILLNPGVGILGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTT 95

Query: 142 FQVLRTVPPLAWLPLSLAAFQDSNPSAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKV 201
            ++LR +PPLAW+PL+LA F     S  F+IFI + +P++INT  GV+++P      AK 
Sbjct: 96  VELLRPIPPLAWVPLALAWFGIGESSMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKT 155

Query: 202 LRLNQLEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGG-VGIGFFIWDAWNSS 260
           L  +  +    +++P+++P I TGLR+G G++W+ +VAAEML G   G+G+ I  A++ S
Sbjct: 156 LGGSTKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLS 215

Query: 261 RLPDIIVALAYIGVVGFMLDK 281
           ++  ++ ++  IG++G +LDK
Sbjct: 216 KMNIVVASMIIIGIIGIILDK 236