Pairwise Alignments

Query, 815 a.a., nitrite reductase large subunit from Agrobacterium fabrum C58

Subject, 567 a.a., NADH oxidase from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (297), Expect = 6e-31
 Identities = 104/376 (27%), Positives = 173/376 (46%), Gaps = 44/376 (11%)

Query: 4   KLVIIGN---GMAPGRMLENLFETAPGLYDVTIFNAEPRVNYDRIMLSPVLSGE-KSYED 59
           K+VIIG    G +       L E A    ++ +F   P V++    L   + G+ K   +
Sbjct: 3   KIVIIGGVAGGASAAARARRLSEDA----EIIMFERGPYVSFANCGLPYHIGGDIKERSN 58

Query: 60  IVIHNDEWYAAN-NVTLHKGAKVTRIDRANKIVTSENGITAS-----YDRLVIATGSLPF 113
           +++   E + A  NV +    +V RI+RA K +T  N +  S     YD L+++ G+ P 
Sbjct: 59  LLLQTPESFLARFNVDVRTMNEVLRINRAAKTITVRNLLDQSEYDENYDFLLLSPGAGPV 118

Query: 114 IIPVPGHQLPGVLAYRDLDDVTKMLEIAK--GKGRAIVIGAGLLGLEAAYGLKRQGMDVT 171
           I P+PG Q P   + R++ D+ K+++  +      A V+G G +GLE        G+  T
Sbjct: 119 IPPIPGIQNPLTHSLRNIPDMDKIIQTLQMNKPEHATVVGGGFIGLEMMEAFHHLGIKTT 178

Query: 172 VIHLMPTIMERQLDPAAAYLLEKALNERGIDIITKANTKCI----------------LGE 215
           +I +   +M   +D   A      +  +GID+   A  K +                L  
Sbjct: 179 LIEMADQVM-TPVDREMAGFAHAEIRAKGIDLRLGAALKSVEYRPAATLPSAESGESLEH 237

Query: 216 EKVEG---IELEDGRIIKGDMVVMAVGIRPASGLAKEAGIAVNR--GIVVDDGMMTSDAS 270
           + VEG   + L +G  +  D+++MA+G+RP + LA EAG+ +    GI V++ M TSD +
Sbjct: 238 KHVEGELDLLLSNGDTLTTDILIMAIGVRPETKLAAEAGLQLGELGGIWVNEQMQTSDPA 297

Query: 271 IYALGECAEHRGMCYG------LVAPLYESARVLADRLCGGSAEYHGSVTNTKLKVTGIN 324
           IYA+G+  E +    G      L  P     R+ AD + G +  Y G+      K+  + 
Sbjct: 298 IYAVGDAVEEKDFVTGKQTLVPLAGPANRQGRMAADNMLGRNESYQGTQGTAICKIFDLA 357

Query: 325 LFSAGDFAEGDDREEI 340
           + S G   +   RE I
Sbjct: 358 VASTGKNEKQLKREGI 373