Pairwise Alignments

Query, 815 a.a., nitrite reductase large subunit from Agrobacterium fabrum C58

Subject, 1356 a.a., Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) from Klebsiella michiganensis M5al

 Score =  452 bits (1163), Expect = e-131
 Identities = 277/777 (35%), Positives = 416/777 (53%), Gaps = 25/777 (3%)

Query: 5    LVIIGNGMAPGRMLEN-LFETAPGLYDVTIFNAEPRVNYDRIMLSPVLSGEKSYEDIVIH 63
            LV++G+GM     LE  +       Y + +F  E    YDR+ L+   +G +S E + + 
Sbjct: 405  LVLVGHGMVGHHFLEQCVSRDLHQQYRIVVFCEERYAAYDRVHLTEYFAG-RSAESLSLV 463

Query: 64   NDEWYAANNVTLHKGAKVTRIDRANKIVTSENGITASYDRLVIATGSLPFIIPVPGHQLP 123
              +++  + + L     V  IDR  ++V    G    +D+LV+ATGS PF+ PVPGH L 
Sbjct: 464  EGDFFTQHGIELRLSESVASIDREARVVRDAFGHETHWDKLVLATGSYPFVPPVPGHNLE 523

Query: 124  GVLAYRDLDDVTKMLEIAKGKGRAIVIGAGLLGLEAAYGLKRQGMDVTVIHLMPTIMERQ 183
            G   YR LDD+ ++   A    R +VIG GLLGLEAA  LK+ G++  V+   P +M  Q
Sbjct: 524  GCFVYRTLDDLDQIAARAATARRGVVIGGGLLGLEAANALKQLGLETHVVEFAPNLMAVQ 583

Query: 184  LDPAAAYLLEKALNERGIDIIT-KANTKCILGEEKVEGIELEDGRIIKGDMVVMAVGIRP 242
            LD   A +L + ++E G+ + T KA T+ +  E+ ++ +   DG  +  DM+V + GIRP
Sbjct: 584  LDNGGAAMLREKISELGVGVHTSKATTEIVRNEQGLQ-LNFADGSSLATDMLVFSAGIRP 642

Query: 243  ASGLAKEAGIAVNR--GIVVDDGMMTSDASIYALGECAEHRGMCYGLVAPLYESARVLAD 300
               LA+  G++V    GI +D+   TSD  + A+GECA      YGLVAP Y+ AR  A 
Sbjct: 643  QDALARSGGLSVGERGGICIDNQCRTSDPDVLAIGECALWENKIYGLVAPGYQMARAAAA 702

Query: 301  RLCGGSAEYHGSVTNTKLKVTGINLFSAGDFAEGDDR--EEIVLRDATAGVYKRLILKEN 358
             L G +  + G+  +TKLK+ G+++ S GD A+G     +          VYK++++  +
Sbjct: 703  TLAGEAGSFSGADMSTKLKLLGVDVASFGD-AQGRTPGCQSYQWTHGPQQVYKKIVVSAD 761

Query: 359  --RIIGAVLYGETADGSWFFDLMKKSTDISAMRETLIFGQAYQGGSPLDPMAAVAALPDD 416
               ++G VL G+  D +    +M     +    E+LI   A +G +P      VAALPD 
Sbjct: 762  GKNLLGGVLVGDAGDYATLLQMMLNGMALPKHPESLIL-PALEGSAP--KALGVAALPDG 818

Query: 417  AEICGCNGVCKGKITSAITSKGLTSLDDVRAHTKASASCGNCTGLVEQLMTLTLGDTYNP 476
            A+IC C+ V KG I  A+ S G   +  +++ TKA+  CG C+ LV+Q+M   L +    
Sbjct: 819  AQICSCHNVSKGDICQAV-SGGAGDMAAIKSRTKAATGCGGCSALVKQVMEYQLAEQ-GV 876

Query: 477  AAVQPMCKCTDLGHDDVRRLIKAKGLKTIPAVMQELEWKTSCGCAKCRPALNYYLVCDFP 536
               + +C+       ++  L++   ++T   ++    +    GC  C+P +   L   + 
Sbjct: 877  EVKKDICEHFPWSRQEIYHLVRVNHIRTFEQLIAR--YGQGHGCEVCKPLVASVLASCW- 933

Query: 537  DEYA---DDYQSRYINERVHANIQKDGTYSVVPRMWGGVTNADELRAIADVVDKFEIPLV 593
            +EY         +  N+R  ANIQKDGTYSVVPRM  G    D L AI  +  ++++   
Sbjct: 934  NEYLLKPAHLPLQDTNDRYFANIQKDGTYSVVPRMAAGEVTPDGLIAIGQIAKRYQL-YS 992

Query: 594  KVTGGQRIDLLGIEKEDLPAVWADLGKAGFISGQAYAKGLRTVKTCVGEQWCRFGTQDST 653
            KVTGGQRIDL G   E LPA+W +L +AGF +G AY K LRTVK+CVG  WCR+G QDST
Sbjct: 993  KVTGGQRIDLFGARLEQLPAIWRELAEAGFETGHAYGKSLRTVKSCVGSTWCRYGVQDST 1052

Query: 654  GLGIRIEKFMWGSWTPAKLKLAVSGCPRNCAEATCKDIGVICVDSGFEIHFAGAAGLDIK 713
            GL + +E    G   P K+K+AVSGC R CAEA  KDIGVI  + G+ ++  G  G+  +
Sbjct: 1053 GLAVTLEHRYKGLRAPHKIKMAVSGCTRECAEAQGKDIGVIATEKGWNLYVCGNGGMKPR 1112

Query: 714  GTEVLGLVHTEDEALEHIVALTQMYREQARYLERIYKWAKRI--GYDEVRRQIMDDA 768
              ++      E   +  I  L   Y   A  L+R   W   +  G D +R  I++D+
Sbjct: 1113 HADLFASDLDEATLIRSIDRLLMFYIRTADRLQRTSTWMDNLEGGVDYLREMILEDS 1169



 Score =  254 bits (648), Expect = 3e-71
 Identities = 152/374 (40%), Positives = 214/374 (57%), Gaps = 9/374 (2%)

Query: 1   MTQKLVIIGNGMAPGRMLENLFETAPGLYDVTIFNAEPRVNYDRIMLSPVLSGEKSYEDI 60
           MT++LVIIGNGMA  R+ + L E     + +TI   EPR  Y+RI LSPVL  EK+    
Sbjct: 1   MTRQLVIIGNGMAATRLAQALVERDARRFSITIIGDEPRQAYNRIQLSPVLGAEKTAGAT 60

Query: 61  VIHNDEWYAANNVTLHKGAKVTRIDRANKIVTSENGITASYDRLVIATGSLPFIIPVPGH 120
            +   EWY+ +NVT+  G  VT +D A + + +  G    +D LV ATGSLPF+ P+PG 
Sbjct: 61  RLLPAEWYSQHNVTVRAGETVTAVDMAARTLQTTAG-ELGWDELVFATGSLPFLPPLPGI 119

Query: 121 QLPGVLAYRDLDDVTKMLEIAKGKGRAIVIGAGLLGLEAAYGLKRQGMDVTVIHLMPTIM 180
            LP V A+R L DV  +L I    G A+VIG G+LG+EAA  L+R G  VT++H    +M
Sbjct: 120 TLPHVFAFRTLADVEGILAI---DGPAVVIGGGVLGVEAAAALRRHGDSVTLLHRGSWLM 176

Query: 181 ERQLDPAAAYLLEKALNERGIDIITKANTKCILGEEKVEGIELEDGRIIKGDMVVMAVGI 240
           E+Q D      L+  L ERGI  + ++    I   +    + LEDGR      VV+A G+
Sbjct: 177 EQQTDAFVGEQLQMLLAERGIGCVMESRIAAIDEHQ----VLLEDGRAFAASRVVLATGV 232

Query: 241 RPASGLAKEAGIAVNRGIVVDDGMMTSDASIYALGECAEHRGMCYGLVAPLYESARVLAD 300
           +P   LA+ +G+A  RGI+VD  + T+   + ALGEC E  G  +GLVAP    A VLAD
Sbjct: 233 QPNKRLAERSGLACGRGILVDRRLATAQPGVSALGECCEIDGQTWGLVAPCLRQAEVLAD 292

Query: 301 RLCGGSAE-YHGSVTNTKLKVTGINLFSAGDFAEGDDREEIVLRDATAGVYKRLILKENR 359
           RLC    E +    + T+LKVT I LFSAG+    +  +     D     Y+RL+L++ +
Sbjct: 293 RLCAIPGEDFRWQDSGTRLKVTDIELFSAGELRADEQDDVYTSWDPLDRHYRRLLLRDGK 352

Query: 360 IIGAVLYGETADGS 373
           + G +L G+ +  +
Sbjct: 353 LRGVLLLGDCSSAA 366