Pairwise Alignments

Query, 882 a.a., nitrate reductase large subunit from Agrobacterium fabrum C58

Subject, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  301 bits (771), Expect = 1e-85
 Identities = 226/795 (28%), Positives = 354/795 (44%), Gaps = 118/795 (14%)

Query: 6   KTTCPYCGVGCGVIATVNDSGVVSVKGDPDHPANFGRLCSKGSALAETIDLDGRLLHPEI 65
           K  C +CG GC V+    D  VV+ +GDP+ P N G  C KG  L++ +    RL  P +
Sbjct: 45  KAPCRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLL 104

Query: 66  AGRRA-----------AWDEALDLVASRFSDAIAEHGPDSVAFYVSGQLLTEDYYLANKL 114
             +             +WD A D++A ++  ++   GP SV  + SGQ    + Y A KL
Sbjct: 105 RMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKL 164

Query: 115 MKGFIGSANIDTNSRLCMSSSVAGHRRAFGADTVPGTYEDMELADLVILTGSNLAWCHPV 174
           MK    S NID N+R CM+S+V G  R FG D   G Y+D E AD  +L GSN+A  HPV
Sbjct: 165 MKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPV 224

Query: 175 LYQRLAAAKAARPGMKVVVIDPRRTMSADIADMHLAIRPDGDVALFTGLLAHLFASSAID 234
           L+ R+   + + P +KV V+      S ++AD      P  D+A+   +  ++  + A++
Sbjct: 225 LWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVN 284

Query: 235 RGYVENHT---------------------------------AGFEAATQAASEHSLPEIA 261
             +V  HT                                   FE   ++ + +++ + +
Sbjct: 285 WDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKAS 344

Query: 262 EATGLTIAELIPFYELF-ERTEKTVTCYSQGVNQSESGTDKVNAIINCHLATGRIGRPGM 320
           E +G++  +LI   + + +   K ++ ++ G+NQ   G    + + N HL TG+I  PG 
Sbjct: 345 EISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGN 404

Query: 321 GPFSLTGQPNAMG-GREVGGLANMLAAHMSIENADDRDRVQRFWASP--AIAQKPGLKAV 377
            PFSLTGQP+A G  REVG  A+ L A M + N   R   ++ W  P   I +KPG  AV
Sbjct: 405 SPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAV 464

Query: 378 DMFRAVADGRIKALWIMATNPVVSMPDAGAVEVTIKACP--FVVVSDVMANTDTARHAHV 435
              R + DG +   W+   N + + P+     +     P  F+VVSD    T TA+ A +
Sbjct: 465 QQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYP-TVTAQAADL 523

Query: 436 LLPSLGWGEKDGTVTNSERRISRQRSFLDAPGEAKADWWQMAEVARRMGFDAAFAYQQPS 495
           +LP+  W EK+G   N+ERR       +   GE+ +D WQ+ E ++R   +  +    P 
Sbjct: 524 VLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVW----PE 579

Query: 496 EIFAEHAALSG-------FENAGRRDFDIGGIER-------------------------- 522
           E+ A+     G       F+N     F +                               
Sbjct: 580 ELLAKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEEYAEFGRG 639

Query: 523 --------DSYETMAPVQWPKAGAGEAE---------VTRFFANGRFY-HADGKARFIAT 564
                   D Y  +  ++WP     E +           +  +   FY   DGKA  I++
Sbjct: 640 HGHDLAPYDVYHQVRGLRWPVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWIISS 699

Query: 565 ---ALPETDRTSADYPLTLNTGRIRDQWHTMTRTGKSARLTAHIAEPFAEIHPRDAQALG 621
              A PE    + +Y L L TGR+ + WHT T T +   L   + +    +H  DAQA G
Sbjct: 700 PYEAPPE--MPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARG 757

Query: 622 IKSADLVELESPHGKVLLRALVSERQ--ARGSVFAPMHWNDQFASRARIDVVVAPVTDPH 679
           ++  D V + +  G+V +R     R    +G VF P      F +R  ++ ++   TDP 
Sbjct: 758 LRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPF-----FDARILVNKLILDATDPL 812

Query: 680 SGQPASKNVGVRVTR 694
           S Q   K   V++T+
Sbjct: 813 SKQTDFKKCPVKITK 827