Pairwise Alignments

Query, 333 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 325 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  167 bits (422), Expect = 4e-46
 Identities = 106/306 (34%), Positives = 162/306 (52%), Gaps = 12/306 (3%)

Query: 31  GLIVIILALFTVMSFISPYFLTVDNLRAMAMVFAIESIVVVGMTILLISGGIDLSVGSVT 90
           GL   +LA+  + S +S +FL+ D    +A       ++ VGMT +LI GGIDLSVGSV 
Sbjct: 22  GLAGALLAMVALFSALSSHFLSYDTFSTLANQIPDLMVLAVGMTFILIIGGIDLSVGSVL 81

Query: 91  ALA-----MVAAGWLFLNGVDPWVAAGLAICLTTLVGMAMGFLTTVVGLHHFIVSLGVMV 145
           ALA     +   GW    G   W +A L + +  L G   G +T    +  FIVSLGV+ 
Sbjct: 82  ALAASTVSVAVLGW----GWSVWPSALLGMAVAALAGTVTGSITVAWRIPSFIVSLGVLE 137

Query: 146 IARGVCLLATGGRPLGLYSLPPEFKFIGQGALGGIPLVLIIFLVVVVVFDLLLRRTTAFR 205
           +ARG+    TG R      +   F ++      GI    II L+V+ +   +L RT   R
Sbjct: 138 MARGLAYQMTGSRTA---YIGDSFAWLSNPIAFGISPSFIIALLVIFIAQAVLTRTVFGR 194

Query: 206 KVFYTGSNPKAAAYSGIRVGRVVFATTTLCSMLCGVAGVIYMARFGSAQPSFGVGMELNV 265
            +   G+N +A   +GI          +L  +L GVA +  ++R  +A P+ G G+EL V
Sbjct: 195 YLIGIGTNEEAVRLAGINPKPYKILVFSLMGLLAGVAALFQISRLEAADPNAGSGLELQV 254

Query: 266 IAAAVIGGASLSGGSGTILGAILGAILLSVVSSSLALLNVSVYWQDIIRGSILLAAVLFD 325
           IAA VIGG SL GG G+++    G +++SV+++ LA +  +   + II G++++ AV+ D
Sbjct: 255 IAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGATEPTKRIITGAVIVVAVVLD 314

Query: 326 HYLVRR 331
            Y  +R
Sbjct: 315 TYRSQR 320