Pairwise Alignments

Query, 333 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  194 bits (492), Expect = 3e-54
 Identities = 112/296 (37%), Positives = 168/296 (56%), Gaps = 2/296 (0%)

Query: 33  IVIILALFTVMSFISPYFLTVDNLRAMAMVFAIESIVVVGMTILLISGGIDLSVGSVTAL 92
           ++ +L L  V+SF++P F TVDNL  +    ++ +I+ VGMT+++++ GIDLSVGSV AL
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLAL 94

Query: 93  AMVAAGWLFLNGVDPWVAAGLAICLTTLVGMAMGFLTTVVGLHHFIVSLGVMVIARGVCL 152
               A  L    V   VA   A+     +G   G +     +  FI +L  M + RGV +
Sbjct: 95  CGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTM 154

Query: 153 LATGGRPL--GLYSLPPEFKFIGQGALGGIPLVLIIFLVVVVVFDLLLRRTTAFRKVFYT 210
           + T GRP+  G       F + G G   GIP+ + + +VV      LL  T   R V+  
Sbjct: 155 VYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAV 214

Query: 211 GSNPKAAAYSGIRVGRVVFATTTLCSMLCGVAGVIYMARFGSAQPSFGVGMELNVIAAAV 270
           G N  A   SGI V RV      +C +L  +AG+I  +R  SAQP+ G+G EL+ IAA V
Sbjct: 215 GGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAVV 274

Query: 271 IGGASLSGGSGTILGAILGAILLSVVSSSLALLNVSVYWQDIIRGSILLAAVLFDH 326
           +GG SL GG G I+G ++GA+++  ++++L LL+VS Y+Q I +  ++L AVL D+
Sbjct: 275 LGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVDN 330