Pairwise Alignments

Query, 493 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 31/237 (13%)

Query: 269 QRSVENEKIRLQSVIICRDAGGQDVERGFRLRENEVGIGPGERLMINGEQGVNRRLLFAA 328
           Q SV    IRL    I +   G+++     L  N      GE L I G  G  +  +   
Sbjct: 10  QHSVGKPVIRLSG--ISKSFDGKEIIGNLNLDVNH-----GEFLTILGPSGCGKTTVLRM 62

Query: 329 MAGLWPWGQGRIEMPEQSDTLFIAQ----------HGYLPAGSLREILAY----PRAPQR 374
           +AG     QG+I + +Q  T   A+          +   P  ++ E +A+     + PQ 
Sbjct: 63  IAGFETADQGQILLDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQS 122

Query: 375 FTDADYLAALIACGLGEMTSRLDENIRWDKKLDSDEQASIRIANALLLKPKFVVIDDLLE 434
             +   + AL    L EM  R         +L   +Q  I IA A++ KPK +++D+ L 
Sbjct: 123 EIEPRVMEALRMVRLAEMAQRKPH------QLSGGQQQRIAIARAVVNKPKVLLLDESLS 176

Query: 435 GLE----KQTQDTLAQVLNGMEGAAIIYIGRSETFLSVLAPAVAHLDHASQKETSPK 487
            L+    KQ Q  L Q+   +    I      E  LS+    +       +++ SP+
Sbjct: 177 ALDYKLRKQMQSELKQLQRQLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPR 233