Pairwise Alignments

Query, 499 a.a., ribose ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 504 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  407 bits (1047), Expect = e-118
 Identities = 216/486 (44%), Positives = 313/486 (64%), Gaps = 5/486 (1%)

Query: 10  MRGISKIFPGVKALSNVNFTVEYGRIHAVVGENGAGKSTLMKILSGSYAPTTGTTEIAGV 69
           ++ ISK F G+ AL +VNF V  G +HA++GENGAGKSTLM++L G   P+ G   I G 
Sbjct: 8   LKSISKSFGGIHALRSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQGEVVINGK 67

Query: 70  EVQMRRPADAQKLGIRMVHQELNLVPDLTVAENIYLGRMPHRRFLVDRQAMLRKAAAVLK 129
             ++R P DA+ LGI ++HQEL L PDL+VAENI+LG +P    L+ R ++ R+A  ++ 
Sbjct: 68  RTELRDPRDARALGIVVIHQELALAPDLSVAENIFLGELPT---LISRFSLRRRAKQLID 124

Query: 130 ELEAAIDPKARLGDLPISQQQLVEIAKSYSADPRIIVLDEPTSSLSEHETTALFSILRKM 189
            L   IDP   +G L ++ QQ+VEIAK+ S D +IIV DEPT+ L   +   L  I+R +
Sbjct: 125 RLGFDIDPGRLVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKLHQIIRGL 184

Query: 190 KSQGIAIIYISHRLKEVLDIADDVTILRDGSMIDTRPAAGITAAEMIRLMVGREVANVFP 249
           + +G+ I+YISHRL EV DIAD +T+++DG  + T     +   ++IR+MVGR +AN+FP
Sbjct: 185 RDRGVGIVYISHRLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVGRPIANMFP 244

Query: 250 KTPSK-IGPVAFKVTGLSDGEKFHDVGFDVRSGEILGLTGLVGAGRTEVAQAIFGLAPLA 308
           +   + IG     V  L+ G    DV F VR+GEI+GL GL+G+GRTEVA+AIFG  PL 
Sbjct: 245 ERSQRTIGAELLNVKKLNAGRMVRDVSFSVRAGEIVGLGGLIGSGRTEVARAIFGADPLD 304

Query: 309 TGRIEINGKAVTIGSPAAAVKAGVAYVPEDRKGDGIVPSMSVRENISLPVLRR-LSRLGR 367
           +G I + GKA+ + SP  AVKAG+  VPEDRK  G+V    +R N ++  +   ++ LG 
Sbjct: 305 SGTISLKGKALKLKSPRDAVKAGIGLVPEDRKEHGVVIDKPIRVNATMARMSSVVNALGF 364

Query: 368 IGMSRDRGLAAKYTRDFSIVPPDPERRINLLSGGNQQKAIISRWLAAGPKVLILDEPTRG 427
           +  + +R       +   +     +  ++ LSGGNQQK ++++W  AG  V+ILDEPTRG
Sbjct: 365 LKPALERTDVTALGKSLRLKASSIDAPVSSLSGGNQQKVVLAKWFHAGGDVIILDEPTRG 424

Query: 428 VDVGAKAEIHRIIGELVAGGMAVVMISSELPEVMGVCDRVVVMRDGRASSPIARGDLTEE 487
           VDVGAKAEI+ +I +L   G AV++ISSE  E+ G+CDRV+ M  G+    +   + +EE
Sbjct: 425 VDVGAKAEIYALINKLAEDGKAVLVISSEHQELFGLCDRVLAMGQGQIRGELTPSNYSEE 484

Query: 488 RIMALA 493
            ++ L+
Sbjct: 485 NLLGLS 490



 Score =  100 bits (248), Expect = 2e-25
 Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 9/222 (4%)

Query: 274 VGFDVRSGEILGLTGLVGAGRTEVAQAIFGLAPLATGRIEINGKAVTIGSPAAAVKAGVA 333
           V FDVR GE+  L G  GAG++ + + + G    + G + INGK   +  P  A   G+ 
Sbjct: 24  VNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQGEVVINGKRTELRDPRDARALGIV 83

Query: 334 YVPEDRKGDGIVPSMSVRENISLPVLRRLSRLGRIGMSRDRGLAAKYTRDFSIVPPDPER 393
            + ++     + P +SV ENI L  L  L  + R  + R     AK   D      DP R
Sbjct: 84  VIHQEL---ALAPDLSVAENIFLGELPTL--ISRFSLRR----RAKQLIDRLGFDIDPGR 134

Query: 394 RINLLSGGNQQKAIISRWLAAGPKVLILDEPTRGVDVGAKAEIHRIIGELVAGGMAVVMI 453
            +  LS  +QQ   I++ L+   K+++ DEPT  +      ++H+II  L   G+ +V I
Sbjct: 135 LVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKLHQIIRGLRDRGVGIVYI 194

Query: 454 SSELPEVMGVCDRVVVMRDGRASSPIARGDLTEERIMALATG 495
           S  L EV  + DR+ VM+DG     +A  D+  + I+ +  G
Sbjct: 195 SHRLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVG 236