Pairwise Alignments

Query, 402 a.a., permease from Agrobacterium fabrum C58

Subject, 404 a.a., MFS transporter from Methanococcus maripaludis S2

 Score =  244 bits (624), Expect = 2e-69
 Identities = 138/373 (36%), Positives = 210/373 (56%), Gaps = 5/373 (1%)

Query: 26  ATWFAVLSMAATSFALVSAEFLPAGLLTPMARDLGITEGTAGQVVTATASVGAVTALFSN 85
           + W A+ +M+  +  LV++EF+P  LLTP+A DL ITEGTAGQ ++ +     +T+LF  
Sbjct: 15  SAWGAIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLT 74

Query: 86  VLIGKLNRKTVLVGLSALAIGSNILASFATDFWLLLVGRAGLGIALSGFWALSVAVVARL 145
            +IG  +R+ VL+  +AL   S +L +FA D  +L++GRA LG+ + GFW++S A V R+
Sbjct: 75  QIIGNKDRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRI 134

Query: 146 VGANATGRGMAIVTLGVSLATIAAPSMGALISDWLGWRVAMSMTAGLAAIAMLLQILSLP 205
           V A++  + +AI+  G +L+T  A  MG+ +   +GWR A  M   LA IA + Q  S+P
Sbjct: 135 VSASSVPKALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIP 194

Query: 206 TLPASTSN----SLADVFRLTRRPSVQLGMLAILLLMTGHFAGSVYVRPFLEQVTHLDTT 261
            LP   SN        VF L +   V LGM++++L   G  A   Y+RPFLE VT ++  
Sbjct: 195 KLPKENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTYLRPFLEMVTKVNVE 254

Query: 262 PIALALLGFGVASVLGNVAGGRMADNSIRLALAVTAALMGFATLFLVFWGAHTSAAFALV 321
            ++L LL  G+  ++G      M    +   + +   LM    + ++ +G   +A F L+
Sbjct: 255 TLSLVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLMLSFGTSLAAVFVLI 314

Query: 322 ALWGFAFGMAPVVLPTNLSRGAPDALEAAGSLMVVSFQVAISIGAVFGGYIVDYYGATAP 381
           ++WGF    APV   T LSR  P   EA G LMV   Q+AI++GA FGG   D  G  + 
Sbjct: 315 SIWGFLATSAPVAWWTWLSRILPTRAEAGGGLMVAIIQLAITLGAAFGGVFFDTAGYQST 374

Query: 382 LSLTA-VLAAATL 393
              +A +L  AT+
Sbjct: 375 FMFSALILGIATI 387