Pairwise Alignments

Query, 277 a.a., proline/glycine betaine ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 350 a.a., putative glycine betaine/L-proline transport system, ATP binding subunit from Phaeobacter inhibens DSM 17395

 Score =  301 bits (771), Expect = 1e-86
 Identities = 154/264 (58%), Positives = 197/264 (74%), Gaps = 1/264 (0%)

Query: 2   TDIHIRNVSKIFGGNWKAALSMAQ-QGAEKSAILAKTGCSVGLDNVSLDIEAGRIFVIMG 60
           T I IRN+ KIFG N    L M + QG  KS +L +    +GL ++S+DI+AG I VIMG
Sbjct: 4   TKIQIRNLYKIFGANPGTVLPMVRNQGMGKSQLLEEHKHVLGLQDISIDIQAGEISVIMG 63

Query: 61  LSGSGKSTLVRHINRLIEPTSGEILVGGDNVLALKAKELRDFRNRRVSMVFQNFGLMPHR 120
           LSGSGKSTL+RH+NRLIEPT+GEIL+ G +V+ L   +LR+ R R +SMVFQ F L+PH+
Sbjct: 64  LSGSGKSTLIRHLNRLIEPTAGEILLDGQDVMDLDPVQLREMRQRSMSMVFQKFALLPHK 123

Query: 121 TVLQNVVYGQRVRGLTKADARPIGMKWIETVGLSGYEDKFPHQLSGGMKQRVGLARALAA 180
           TVL+N     RVRG  +A       KW++ VGLSG+E+++P QLSGGM+QRVG+ARAL A
Sbjct: 124 TVLENAETALRVRGDDRATCEAAARKWLDRVGLSGFENRYPSQLSGGMQQRVGIARALTA 183

Query: 181 DTDVILMDEAFSALDPLIRADMQDQLLQLEKNLHKTIVFITHDLDEALRIGAQIAILKDG 240
           DTD++L+DEAFSALDPLIR DMQD LL+L+  LHKTIVFITHDLDEAL++   + ILKDG
Sbjct: 184 DTDIMLLDEAFSALDPLIRTDMQDLLLELQTELHKTIVFITHDLDEALKLADHLVILKDG 243

Query: 241 KLVQVGTPDQILNSPANDYVARFV 264
            +VQ G P  I+ +PA+ Y+  FV
Sbjct: 244 AVVQQGPPQGIVMNPADPYIEAFV 267