Pairwise Alignments

Query, 285 a.a., proline/glycine betaine ABC transporter permease from Agrobacterium fabrum C58

Subject, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  106 bits (264), Expect = 6e-28
 Identities = 67/223 (30%), Positives = 122/223 (54%), Gaps = 5/223 (2%)

Query: 54  AIFLVFLVL-AWFAAKKISLVIMVAVMLFIVGALGLWDLTMQTLALMLIASLISIVIGVP 112
           A+ L FLV  AWF      LV   A  ++  G+L  W LT+  L  + +A++ + ++ V 
Sbjct: 14  AVLLAFLVQPAWFEPLLKPLVQENAPAVYNQGSL-FW-LTVLHLRTVFVATVAATIVAVS 71

Query: 113 IGILLAKSEWARRITLP--ILDVMQTMPSFVYLIPAIMLFGLGKVPAVLATIVYAAPPLI 170
           + I++ +   A  + L   ++++ QT P    L  A+ ++G G+ P ++A  +Y   P+ 
Sbjct: 72  LAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLALAVPIYGFGEKPTLIALFLYGLLPIF 131

Query: 171 RLTDLGIRQVDREVVEAATAFGGSPRQILFGVELPLATPTIMAGLNQTIMMALSMVVVAS 230
                G+  +   V+EAA   G + RQ LF +ELPLA P I+ G+  +++++L+   + S
Sbjct: 132 ENALTGLTTLPPTVMEAARGAGMTGRQRLFRIELPLALPVILTGIRLSVVISLATATIGS 191

Query: 231 MIGARGLGEQVLNGIQTLDVGKGLEAGLGIVILAIVLDRITQG 273
            + AR LGE ++ G+Q+ ++   L+ GL +  LA+++    QG
Sbjct: 192 TVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALAVLIHDALQG 234