Pairwise Alignments

Query, 285 a.a., proline/glycine betaine ABC transporter permease from Agrobacterium fabrum C58

Subject, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

 Score =  226 bits (575), Expect = 6e-64
 Identities = 112/269 (41%), Positives = 177/269 (65%), Gaps = 1/269 (0%)

Query: 4   EVFHISIRGPINEIVRSLVVNYGYVFKAISQTILQAILFVEWALRGLPWWAIFLVFLVLA 63
           + F++ I   +  ++  L+ NY   F  IS  I   + F  + L  +  + + L+  V+ 
Sbjct: 3   DTFNLGIGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIV 62

Query: 64  WFAAKKISLVIMVAVMLFIVGALGLWDLTMQTLALMLIASLISIVIGVPIGILLAKSEWA 123
           W      S++  V  ++ IV  +GLWD +M TL+L++ ++LI++++G+P+GI+ A+S+  
Sbjct: 63  WKTVNLKSMLYSVFFLVIIV-MMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLV 121

Query: 124 RRITLPILDVMQTMPSFVYLIPAIMLFGLGKVPAVLATIVYAAPPLIRLTDLGIRQVDRE 183
             +  P+LDVMQT+PS  YLIPA++ FG+G+VP V+AT+++A PP I+LT LGI QV  E
Sbjct: 122 STLLDPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNE 181

Query: 184 VVEAATAFGGSPRQILFGVELPLATPTIMAGLNQTIMMALSMVVVASMIGARGLGEQVLN 243
           ++E   AFGG+  QIL  +ELP A P+IM G+NQ IM++ SMVV+A  IG+ GLGE +++
Sbjct: 182 LIEVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIIS 241

Query: 244 GIQTLDVGKGLEAGLGIVILAIVLDRITQ 272
           GIQ   +   LEAG+ +  LA++ DRIT+
Sbjct: 242 GIQRYSLAPALEAGIAVTFLAVIFDRITR 270