Pairwise Alignments

Query, 1023 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

Subject, 1026 a.a., Cation/multidrug efflux pump from Pseudomonas stutzeri RCH2

 Score =  894 bits (2309), Expect = 0.0
 Identities = 463/1023 (45%), Positives = 669/1023 (65%), Gaps = 13/1023 (1%)

Query: 3    KFNLSDWALEHRSLVWYFMLVFVLAGVFSYLNLGREEDPNFTIKTMVISAQWPGASAEEV 62
            +FNLS WAL++R +V Y ML+  + G  SY  LG+ EDP FT K MVI  QWPGA+AEE+
Sbjct: 2    RFNLSAWALQNRQIVVYLMLLLAIVGALSYSKLGQSEDPPFTFKAMVIQTQWPGATAEEM 61

Query: 63   ARQVTDRIEKKLEELDNLDHLRSQTVAGRTTIFVELVPETKARNVEPTWVRVRNMIGDIK 122
            +RQVT+RIEKKL E    + + S +  G + +        +++++   W ++R  IGDI+
Sbjct: 62   SRQVTERIEKKLMETGEYERIVSFSRPGESNVTFMARDSMRSKDIPDLWYQIRKKIGDIQ 121

Query: 123  GEFPSGVVGPFFNDRFGDVYGNIYAFTSDGLSQRQLRDLVEDARAKVLTVDDIGKVDVIG 182
              FP GV GPFFND FG  +GNIYA T  G     L+D  +  + ++  V  +GKV++IG
Sbjct: 122  HTFPPGVRGPFFNDEFGTTFGNIYALTGSGFDYAILKDYADRIQLQLQRVKSVGKVELIG 181

Query: 183  AQDEAIYLEFSTRQIAALGIDQQSIIKTLQSQNAVTQSGFVNAGPERVALRVSGQFTSED 242
             QDE I++E S  ++A LG+  +++ + L++QNAVT +GFV    +RV LRV+G F +  
Sbjct: 182  LQDEKIWIELSNVKLATLGVPLEAVRQALEAQNAVTAAGFVETISDRVQLRVTGSFETVK 241

Query: 243  SLRSINLRVNNRFFPLTEVATIRRGYVDPPSSLFRFNGQPAIGLAIGMKTGANLLHFGEA 302
             +R   +RV  R F + +VA + RG+ DPP+   RF G+PA+GLA+ MK+G ++L  G+A
Sbjct: 242  QIRDFPIRVAGRTFRIGDVAEVHRGFNDPPAPRMRFMGEPALGLAVSMKSGGDILVLGQA 301

Query: 303  LDAQMKRVVADLPVGVDVHRVSDQPAVVDEAVSGFTSALFEAIAIVLVISFISLGLRAGM 362
            L+ +  R+  +LP G+ + +VSDQPA V   V  F   L EA+ IVL++SF SLG+R G+
Sbjct: 302  LEQEFARLQQELPAGMQLRKVSDQPAAVKTGVGEFVKVLIEALVIVLLVSFFSLGVRTGL 361

Query: 363  VVAVSIPLVLAITFVYMEYTGISLQRISLGALIIALGLLVDDAMIAVEMMVARLEVGDDL 422
            VVA+SIPLVLA+TF  M Y  I L +ISLGAL++ALGL+VDDA+IAVEMM  ++E G D 
Sbjct: 362  VVALSIPLVLAMTFAAMSYLDIGLHKISLGALVLALGLMVDDAIIAVEMMAIKMEQGYDR 421

Query: 423  RKAATYVYTSTAFPMLTGTLVTVAGFIPVGLNNSAAGEFTFTLFVVIAVSLIVSWIVAVL 482
             KAA++ +TSTAFPMLTGTL+T AGF+P+   NS+ GE+T ++F V+A+SLI SWI AV+
Sbjct: 422  LKAASFAWTSTAFPMLTGTLITAAGFLPIATANSSTGEYTRSIFQVVAISLIASWIAAVM 481

Query: 483  FTPLLGVTILPKTMKSHHEKKGRFASGFS-----------WLLGRALRWRWVTIVATVAL 531
            F PL+G  +LP   K    K G  + G              L+   +R R   I+ T+A+
Sbjct: 482  FVPLIGEKLLPDLAKKTAHKHGTSSEGHDPYATPFYQRVRRLVTFCVRRRKTVILLTLAI 541

Query: 532  FALSIGGMSLVQQQFFPSSDRVELIVDWNLPQNSSIAETNRQMAQFEQEMLAKNTDIDHW 591
            FA ++    LV QQFFP+S R+EL+VD  L + +S+  T  ++ + E E+L +   ID++
Sbjct: 542  FAAAVVLFRLVPQQFFPASGRLELMVDLKLAEGASLKATEAEVRRLE-ELLKERAGIDNY 600

Query: 592  TTYVGEGAPRFILSFDVQTPDVTFGQTVIVTKGLDVRDKVRAELQDYLDRTFIGTDAFVK 651
              YVG G+PRF L  D Q P  +F Q V++   ++ R+ +R+ L + +   F      V 
Sbjct: 601  VAYVGTGSPRFYLPLDQQLPATSFAQFVVLADSIESREALRSWLIERMREDFPSLRGRVT 660

Query: 652  LLDIGPPVGKPVQYRLSGPDIQKVRELGQQLSGIVGEHRLLSNLVMDWNEPTRVVKVDVL 711
             L+ GPPVG PVQ+R++G  I  VR L +Q++  V E+  ++N+ +DW EP+++V+++V 
Sbjct: 661  RLENGPPVGYPVQFRVTGEHIDVVRGLARQVAAKVNENPHVANVHLDWQEPSKMVRLNVD 720

Query: 712  QDKARQLGVSSEDIANAMNSIVEGSTVTQVRDDIYLVNVVARAQLAERGSIETLQNLQLP 771
            QD+AR LGV++ +++  +     GS+V+Q R+D  L+ ++ R    ER  +  L +L +P
Sbjct: 721  QDRARALGVTTAELSGFLRRTFTGSSVSQFREDNELIEILLRGTERERLELSMLPSLAIP 780

Query: 772  ATNGKAVPLSAIANFRYELEQPTIWRRDRIPTVTVKAAIIGPTQPATIVEQLKPKLEAFE 831
              +G++VPLS +A   Y  E+  IW R+R+PTVTV+A + G  QPA +V +++P L    
Sbjct: 781  TESGRSVPLSQVATLEYGFEEGVIWHRNRLPTVTVRADVYGEQQPAALVREIEPTLAEIR 840

Query: 832  KMLPVGYKLETGGSVESSADSQAPIVAVVPLMLFAMATILMVQLQSFSRLFLVFAVAPTA 891
              LP GY LE GG+VE S   Q  + A +PL +  + T+LM QL+SFSR  +VF  AP  
Sbjct: 841  DQLPGGYLLEVGGTVEDSERGQRSVNAGMPLFVIVVLTLLMAQLKSFSRSAMVFLTAPLG 900

Query: 892  LIGVVVALLFSNAPMGFVAILGVLALIGILIRNSVILVVQIEHLRSEGVSAWRAVIEATE 951
            +IGV + LL    P GFVA+LG +AL G+++RNSVILV QIE     G + + A++EAT 
Sbjct: 901  IIGVALFLLLFGQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIGAGQARFSAIVEATV 960

Query: 952  HRMRPIMLTAAAATLALIPISREIFWGPMAYAMMGGIVVGTALTLLFLPALYVAWFRIPR 1011
             R RPI+LTA A+ LA+IP+SR IF+GPMA A+MGG++V TALTLLFLPALY AWFR+ R
Sbjct: 961  RRFRPIVLTALASVLAMIPLSRSIFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRV-R 1019

Query: 1012 EDD 1014
            ED+
Sbjct: 1020 EDE 1022