Pairwise Alignments

Query, 1023 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

Subject, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  566 bits (1459), Expect = e-165
 Identities = 326/1007 (32%), Positives = 558/1007 (55%), Gaps = 20/1007 (1%)

Query: 11   LEHRSLVWYFMLVFVLAGVFSYLNLGREEDPNFTIKTMVISAQWPGASAEEVARQVTDRI 70
            + +R + W   L+F++ G  ++ NLGR EDP FTIK  ++   +PGA+ ++V  +VT  +
Sbjct: 27   INNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTYPL 86

Query: 71   EKKLEELDNLDHLRSQTVAGRTTIFVELVPETKARNVEPTWVRVRNMIGDIKGEFPSGVV 130
            EK +++L  +D + S +  G + I V +       ++   W  +R  + D+KG  P GV 
Sbjct: 87   EKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPGVN 146

Query: 131  GPFFNDRFGDVYGNIYAFTSDGLSQRQLRDLVEDARAKVLTVDDIGKVDVIGAQDEAIYL 190
             P   D FGDVYG + A T +G S ++L D V+  R ++  +D + KV V G Q E +++
Sbjct: 147  PPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQEQVFI 206

Query: 191  EFSTRQIAALGIDQQSIIKTLQSQNAVTQSGFVNAGPERVALRVSGQFTSEDSLRSINL- 249
            E S ++I+ LGI  Q++   L +QN V+ +G +  G E + +  +G+F   + L  + L 
Sbjct: 207  EISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLGDLILS 266

Query: 250  -RVNNRFFPLTEVATIRRGYVDPPSSLFRFNGQPAIGLAIGMKTGANLLHFGEALDAQMK 308
             R       L +VA ++RGYV+ PS++  FNG+ A+ + +    G N++  G+  D ++ 
Sbjct: 267  ERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRFDRRLA 326

Query: 309  RVVADLPVGVDVHRVSDQPAVVDEAVSGFTSALFEAIAIVLVISFISLGLRAGMVVAVSI 368
             +    P+G+D+  V  QP  VD++VSGF  +L +A+AIV+++    +GLR+G+++ + +
Sbjct: 327  ELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLLIGLIL 386

Query: 369  PLVLAITFVYMEYTGISLQRISLGALIIALGLLVDDAMIAVEMMVARLEVGDDLRKAATY 428
             L +  TF++M+Y  I LQRISLGAL+IALG+LVD+A++ VE ++   + G    +AAT 
Sbjct: 387  LLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATD 446

Query: 429  VYTSTAFPMLTGTLVTVAGFIPVGLNNSAAGEFTFTLFVVIAVSLIVSWIVAVLFTPLLG 488
            + T T +P+L  T++ V  F P+GL+  A GE+  TLF V+ +SL++SW  A+  TP   
Sbjct: 447  IVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISLTPFFA 506

Query: 489  VTILPKTMKSHHEKKGRFASGFSWLLGR-----ALRWRWVTIVATVALFALSIGGMSLVQ 543
                         ++     GF +++ R      +R  W+T+   V   A S+ G + V+
Sbjct: 507  DLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYGFTKVK 566

Query: 544  QQFFPSSDRVELIVDWNLPQNSSIAETNRQMAQFEQEMLAKNTDIDHWTTYVGEGAPRFI 603
            Q FFPSS     +VD  +P+ + I  T+  + + E+ + A+ + +D  TT  G+G  RF+
Sbjct: 567  QAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQES-VDSVTTTAGKGLQRFM 625

Query: 604  LSFDVQTPDVTFGQTVIVTKGLDVRD--KVRAELQDYLDRTFIGTDAFVKLLDIGPPVGK 661
            L++  +     +G+  I T+  D +    + A  + +LD  +   +  +K +++GP  G 
Sbjct: 626  LTYSPEKSYAAYGE--ITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIELGPGGGA 683

Query: 662  PVQYRLSGPDIQKVRELGQQLSGIVGEHRLLSNLVMDWNEPTRVVKVDVLQDKARQLGVS 721
             ++ R+ G D   +R +  Q+  ++       N+  DW E T+V++    + +AR+ G++
Sbjct: 684  KIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRYGIT 743

Query: 722  SEDIANAMNSIVEGSTVTQVRDDIYLVNVVARAQLAERGSIETLQNLQL--PATNGKAVP 779
              D+   +     G T+   RD   L+ +VAR    ER  I  ++ +++  PA + + +P
Sbjct: 744  KADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALS-EYIP 802

Query: 780  LSAIA-NFRYELEQPTIWRRDRIPTVTVKA--AIIGPTQPATIVEQLKPKLEAFEKMLPV 836
            L  +   +    E P I R++R   +TV A   ++G    AT+ ++L+P++EA    LP 
Sbjct: 803  LQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAIP--LPP 860

Query: 837  GYKLETGGSVESSADSQAPIVAVVPLMLFAMATILMVQLQSFSRLFLVFAVAPTALIGVV 896
            GY LE GG  ESS D++A +   +PL    M  I +    S     +V+   P A+IGV 
Sbjct: 861  GYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGVT 920

Query: 897  VALLFSNAPMGFVAILGVLALIGILIRNSVILVVQIEHLRSEGVSAWRAVIEATEHRMRP 956
              LL  N P GF+A+LG L+L G+L++N ++L+ QIE     G   + AV++A+  R+RP
Sbjct: 921  TGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRVRP 980

Query: 957  IMLTAAAATLALIPISREIFWGPMAYAMMGGIVVGTALTLLFLPALY 1003
            + + A    L +IP+  +IF+ PMA  +M G+   T LTL+ +P LY
Sbjct: 981  VCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLY 1027