Pairwise Alignments

Query, 900 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 986 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  118 bits (296), Expect = 2e-30
 Identities = 77/227 (33%), Positives = 121/227 (53%), Gaps = 3/227 (1%)

Query: 666 DRLRTALLTSISHDLKTPLAAILGSAGTLKDFADDIPPDARAELLSTIVEESERLNRFIS 725
           +R+++ L++ +SH+L+TPL +I G+ G +   A   P  +  ++L    + S RL R + 
Sbjct: 753 ERMKSELVSIVSHELRTPLTSISGALGLIVGGALGEPSPSMRQMLDIAHQNSLRLGRLVD 812

Query: 726 NLLDMTRIGSGAMEPNYGLHFLGDMVGTALSRAAKIVVRHEVVLDI-PSDLPMLKVDPVL 784
           +LLDM ++ +G M      H L   +  A+        +H V L++ P+    L  D   
Sbjct: 813 DLLDMDKLVAGKMALALRAHSLQVQLQLAVGANQGYAAQHRVQLELLPTPSLQLMADDDR 872

Query: 785 FEQVLFNLIDNAAKYAPEHTTIAIRGWRQGKNIFLSVADEGPGIPPDDLERVFDSFYRVR 844
            +QVL NLI NA K++P+  T+ + G R+G  + + V D+GPGI P+   R+F  F +  
Sbjct: 873 LQQVLANLISNAVKFSPQDGTVRLGGERRGDWVRIWVRDQGPGIAPEFRARIFQKFSQAD 932

Query: 845 KVDHVQ-AGTGLGLSICKGFIEAMGGSIRAENRADRGGAQFTIGLPV 890
             D  Q  GTGLGL+I K  IE M G I  ++     GA F   LP+
Sbjct: 933 SSDTRQKGGTGLGLAISKELIEHMHGRIGFDSEPGH-GACFWCELPL 978