Pairwise Alignments

Query, 900 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

 Score =  707 bits (1824), Expect = 0.0
 Identities = 398/899 (44%), Positives = 566/899 (62%), Gaps = 21/899 (2%)

Query: 1   MPDDISDMPSRPSPDALLENAQREARGRLKIFLGAAPGVGKTYEMLMSGRAKLADGVDTV 60
           MP +  D+ SRP PDALL  A++  RG+L +FLGAAPGVGKT+ ML   R    +G D V
Sbjct: 1   MPHNDRDLKSRPDPDALLALAEQGRRGKLTVFLGAAPGVGKTFAMLTRARRLKEEGGDIV 60

Query: 61  IGVVETHGRRETEALVEGLSVVPRKRIDYRGQVLEEMDIDAILARRPALVLVDELAHTNA 120
           IG+VETHGR ET AL+EGL V+PR+++ + G+ L E D+DA LARRP ++LVDELAHTN 
Sbjct: 61  IGLVETHGRGETAALLEGLEVLPRRQVLHNGRTLHEFDLDAALARRPRVILVDELAHTNF 120

Query: 121 AGSRHPKRYMDVQEILAQGINVYTTLNIQHVESLNDVVAQITRIRVRETVPDSIIDRADD 180
             SRHPKRY D++E++  GI+V+T LNIQH+ESL+DVVA I  + VRE VPD++++RADD
Sbjct: 121 GESRHPKRYQDIEELVDAGIDVWTALNIQHLESLSDVVAHIAGVPVRERVPDTVLNRADD 180

Query: 181 VEIIDITPDDLIKRLQDGKVYLPRTARRAIENYFSRGNLTALRELALRRTAQRVDEQLLN 240
           V ++D+ P +LI+RL++GKVYLP  A+RA + +F  GNLTALRELALRRTA RVD+Q+++
Sbjct: 181 VLLVDLPPAELIERLKEGKVYLPDNAKRAADRFFRLGNLTALRELALRRTADRVDDQMVD 240

Query: 241 HMQSHAISGPWAAGDRVLVCLDHGRNGPGLVRYARRQADRLRAPWTALHLDTPRSQQLSE 300
           +++ +AI GPW A +R+LVC+        +VR A R A  L A W  + ++  R++  S 
Sbjct: 241 YLRQNAIEGPWGAAERLLVCIGPDPLSEKVVRTASRLASSLNADWMVVSVE--RAEAESS 298

Query: 301 AEKDRLAGTMRLAQQLGGETVTLPALDLTREIIAYANANNFTHIIIGRPRKSWWQRIFQR 360
               +L  T RLA+QLG ET  +   D   EI+  A   + T I+IG  R  +  R+F+R
Sbjct: 299 GAMRQLDETFRLAEQLGAETRRIIGNDFVEEILKLARREHATQIVIGTRRHYFPLRLFRR 358

Query: 361 SLTHDLIDHAGDISVHVISGDKNEEKPGQAVKLAPARSPQSF------RSYLNSTLFVGL 414
           SL   L   A  I++H+++        G A  + PA   +S       R    +T     
Sbjct: 359 SLPDALAARAAGIAIHLVT-------DGSAPAVKPAARRRSTLPDGWGRGVAIATGTAAA 411

Query: 415 AIIVGIVLDQTLDVQNLALVFLMAVLAAAVRGGLGPALYASLLGALAFNFFFLEPRYTLT 474
           A  +G++++Q + +QN++L+FL+AVL +A   G   A+ A+L+  LA+NF F+EP  T T
Sbjct: 412 ATALGLLIEQFVVLQNISLLFLLAVLVSATYAGYVAAIAAALISILAYNFCFIEPVGTFT 471

Query: 475 VSSPDSLVALLFYFGVALVASNLTVAVQRQAASARSRARTTEDLYLFSKKLAGTGTLDDV 534
           V+ P  + AL  +   A++A  L   V+ QA +AR RA  T+ LY FS+KL+GT   +DV
Sbjct: 472 VAEPHEVFALFVFLAAAMLAGGLASRVREQAKTARRRAAATQALYDFSRKLSGTANAEDV 531

Query: 535 LWAAAYQMASMLKVRVVLLMPENGAIAVKAGYPPDDTLVDADIAAAQWAWEHNKAAGRGA 594
           LWAA  Q+ + L+    LL+PE+G + + A +PPD  L   D  A +WA+E  +AAG G 
Sbjct: 532 LWAAVTQIHATLRRNAALLLPEDGDVRLMAAWPPDTELGLTDTMAGRWAFEKKEAAGNGT 591

Query: 595 DTLPGAKRLYLPLRTGSGAVGVVG-LDDDRSGPLLTPEQQRLFDALADQAALAVERIQLA 653
            TLP +   + PL +  G VGV G L +D+    L   ++R   A+ DQ A+AV+R +L+
Sbjct: 592 GTLPNSPFQFRPLMSPHGVVGVFGFLQEDKP---LEINEERALAAILDQTAIAVDRARLS 648

Query: 654 SDVDRARLAAETDRLRTALLTSISHDLKTPLAAILGSAGTLKDFADDIPPDARAELLSTI 713
            +        E ++   ALL+SISHDL+TPLA I G+  +L+   + +  ++R +LL +I
Sbjct: 649 RESLDQAAQLEGEKFLAALLSSISHDLRTPLATITGAVTSLRQLGERMSEESRDDLLKSI 708

Query: 714 VEESERLNRFISNLLDMTRIGSGAMEPNYGLHFLGDMVGTALSRAAKIVVRHEVVLDIPS 773
            EES RL RF++NLLDMTRI +G +        + D+V +A+ RA K          I  
Sbjct: 709 EEESGRLTRFVANLLDMTRIEAGTVNAKRDWVDVADVVHSAVERARKYFPGRVFETSIAP 768

Query: 774 DLPMLKVDPVLFEQVLFNLIDNAAKYAPEHTTIAIRGWRQGKNIFLSVADEGPGIPPDDL 833
           DLP+++ D VL  QV+FNL+DNA ++  +   ++I G R+   I LSV D G GI P DL
Sbjct: 769 DLPLIRGDSVLLGQVIFNLLDNANRFGGDE-PVSIYGRREEDEIVLSVTDLGKGIAPADL 827

Query: 834 ERVFDSFYRVRKVDHVQAGTGLGLSICKGFIEAMGGSIRAENRA-DRGGAQFTIGLPVA 891
           +RVFD F+R  K D    GTGLGLSI KGF+EAM G I+AE+ A  R G + ++  PVA
Sbjct: 828 DRVFDKFFRKGKPDGRSLGTGLGLSISKGFVEAMDGRIKAESPAMKRRGTRISMRFPVA 886