Pairwise Alignments

Query, 900 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score =  120 bits (300), Expect = 3e-31
 Identities = 72/229 (31%), Positives = 123/229 (53%), Gaps = 2/229 (0%)

Query: 664 ETDRLRTALLTSISHDLKTPLAAILGSAGTLKDFADDIPPDARAELLSTIVEESERLNRF 723
           E D+L++ L+  +SH+L+TPL +I G    + D       D++ + L    +   RL R 
Sbjct: 408 ELDKLKSELIAVVSHELRTPLTSIKGYVELVLDGTMGAINDSQKKCLQVADDNIVRLRRL 467

Query: 724 ISNLLDMTRIGSGAMEPNYGLHFLGDMVGTALSRAAKIVVRHEVVLDIPSDLPMLKVDPV 783
           I ++LD+++I  G +E       L  +V   +     +     + L+   +   ++ D  
Sbjct: 468 IESMLDLSKIERGELEMYREKVNLRSIVCDVIEYLKPLATEKNIKLNKEVEDIAIEADKD 527

Query: 784 LFEQVLFNLIDNAAKYAPEHTTIAIRGWRQGKNIFLSVADEGPGIPPDDLERVFDSFYRV 843
              QVL NLI+NA K++P + +I + G  + ++I L V D G GIP  D+E++F+ FY+V
Sbjct: 528 RITQVLTNLIENAIKFSPANESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQV 587

Query: 844 -RKVDHVQAGTGLGLSICKGFIEAMGGSIRAENRADRGGAQFTIGLPVA 891
                  + G+GLGL++CK  +EA  GSI  E+   + G+ F I LP++
Sbjct: 588 DSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVESELGK-GSTFHIILPIS 635