Pairwise Alignments

Query, 1581 a.a., glutamate synthase large subunit from Agrobacterium fabrum C58

Subject, 494 a.a., rubredoxin from Methanococcus maripaludis S2

 Score =  129 bits (325), Expect = 6e-34
 Identities = 94/331 (28%), Positives = 150/331 (45%), Gaps = 27/331 (8%)

Query: 929  MSFGSISREAHTTLAIAMNQIGGKSNTGEGG--EES--DRYLPLLNGKPNPERSAIKQIA 984
            MS+G++S+     L+     +     +GEGG  EES  + Y  +L   PN          
Sbjct: 176  MSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESFENAYKYILEYVPN---------- 225

Query: 985  SGRFGVTTEYLVNADMLQIKVAQGAKPGEGGQLPGHKVDATVAKTRHSTPGVGLISPPPH 1044
              ++ +T E L   D ++IK+ Q +KPG GG LP  KV   +AK R    G  ++SP   
Sbjct: 226  --QYSITDENLKKVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKF 283

Query: 1045 HDIYSIEDLAQLIYDLKNVNPEADVSVKLVSEVGVGTVAAGV---AKARADHITVSGFDG 1101
            HDI + +DL   + +L+  +    + +K    +  G + A +     A+ D IT+ G  G
Sbjct: 284  HDINNKDDLKNKVSNLREKSGGKPIGIK----IAAGDIEADLEVATYAKPDFITIDGRPG 339

Query: 1102 GTGASPLTSLKHAGSPWEIGLAETQQTLVLNGLRSRVALQVDGGLKTGRDVIIGALLGAD 1161
             T ASP         P    L   ++    NG+ + ++L + GGL+   D      +GAD
Sbjct: 340  ATAASPKFIKDSTSVPTIFALYRAREFFNKNGI-TDISLVITGGLRISSDFAKAIAIGAD 398

Query: 1162 EFGFATAPLIAAGCIMMRKCHLNTCPVGVATQDPVLRKRFK--GTPEHVINYFFFVAEEV 1219
                 TA L+A  C   R C    CPVGV TQ P L+ R K   + + + NY     EE+
Sbjct: 399  AIAIGTAALMATACQQYRICDTGECPVGVTTQKPELKDRLKIELSAKKLSNYLRVSTEEL 458

Query: 1220 REILASLGVTRLDEIIGASELLEKDEMLAHW 1250
            +      G   + + +   +L   D  ++++
Sbjct: 459  KTFARLTGNKNIHD-LSVDDLCTSDSEISNF 488