Pairwise Alignments

Query, 481 a.a., homospermidine synthase from Agrobacterium fabrum C58

Subject, 471 a.a., homospermidine synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  491 bits (1264), Expect = e-143
 Identities = 248/473 (52%), Positives = 322/473 (68%), Gaps = 9/473 (1%)

Query: 9   YGDIDGPIIMIGFGSIGRGTLPLIERHFNFDRTRLVVIDPREDIAAFLAERNIRHVQTHL 68
           Y    G I+++GFGSIG+G LPLI RH +    ++ +I   +       +  IR ++  L
Sbjct: 7   YVKAPGRILIVGFGSIGQGLLPLILRHIDITPQKICIITADDRGREEAGKLGIRFIEMPL 66

Query: 69  TKENYKDVLKPLLKGVQGKG-FCVNLSVDAASVDLMRICRKHGMLYIDTVVEPWPGFYFD 127
           T++NY+  L PL+    GK  F VNLSVD +S+ L+  C+  G  Y+DT +EPW G Y D
Sbjct: 67  TRKNYQSELTPLV----GKDDFLVNLSVDVSSIALVEFCQARGARYLDTCIEPWAGGYTD 122

Query: 128 ADADNRARTNYSLRETMLKERARKPGGTTAVSTCGANPGMVSWFVKQALVNLAKDTGLDI 187
                 AR+NY+LRE +L  + +  GG TAV   GANPGMVS  VKQAL+NL +D     
Sbjct: 123 PSKSFAARSNYALRERVLALKDKYRGGPTAVVAQGANPGMVSHLVKQALMNLQQDILGTQ 182

Query: 188 EEPQSHDREGWAKLMQQLGVKGVHVAERDTQRAKEPKPFGAFWNTWSVEGFIAEGFQPAE 247
            EP+S  RE WAKL   L ++ +H+AERDTQ A + K    F NTWS +GF++EG QPAE
Sbjct: 183 SEPKS--REEWAKLAHDLNIEVIHIAERDTQVANQAKAMDEFVNTWSCDGFVSEGAQPAE 240

Query: 248 LGWGTHENWMPKNAKKQKKGSKAAIYLDQPGANTRVRTWCPGLGAQYGFLVTHNEAISIS 307
           LGWGTHE   P++A + ++G  AAIYL  PGA  +VRTW P  G  +GFL+THNEAISI+
Sbjct: 241 LGWGTHEKHFPRDAGRHEEGCGAAIYLKCPGATVKVRTWTPNYGHFHGFLITHNEAISIA 300

Query: 308 DYFTVRNDDGDVTYRPTCHYAYHPCNDAILSLHELFGNGGNPQPIQHVLGEDELVDGADE 367
           D+FT++ + G + YRPTCHYAYHPC+DA++SLHE  G     Q  Q ++  DE+V G DE
Sbjct: 301 DFFTLKQE-GKLVYRPTCHYAYHPCDDAVMSLHEFNGKNFQMQSRQRLM-RDEIVSGIDE 358

Query: 368 LGVLLYGHDRNAYWYGSRLSLEEARSLAPSQNATGLQVSSAVLAGMAWAIENPEAGIVEA 427
           LGVLL GH +NAYWYGS+LS++EAR+L P   AT LQV+SA LAG+ WA+ENP AG+VE+
Sbjct: 359 LGVLLAGHKKNAYWYGSQLSIDEARALVPFNGATSLQVTSAALAGIVWALENPNAGVVES 418

Query: 428 DEMDYRRCLEVQRPYLGPVEGHYTDWTPLDGRPGLFPDNIDMSDPWQFRNILV 480
           DEMDYRR LE+  PYLGPV G YTDWTPL  R  LFP+++D    WQF+N+ V
Sbjct: 419 DEMDYRRNLEIMAPYLGPVVGEYTDWTPLYQRGELFPEDVDDDYAWQFKNVRV 471