Pairwise Alignments

Query, 370 a.a., enhanced entry protein from Agrobacterium fabrum C58

Subject, 290 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 68/212 (32%), Positives = 100/212 (47%), Gaps = 2/212 (0%)

Query: 98  EAYGHFQRGEYVQALDKALTRAQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEG 157
           EA    Q G+Y  AL      A+ G A AQ  +    + GLG+  + + A  W + AAE 
Sbjct: 49  EALARAQAGDYGSALRIWEPLARAGVARAQNNIGACFAEGLGVPENRELACKWLRLAAEA 108

Query: 158 GDPVAMFKFALILMEGKFVT-RDKAKADDFMRRAAEAGNASAQFNWGQILVSENPGAKGL 216
           GDPV    +A + M+G   T  D   A ++ RRAAE G+A AQ     +L+         
Sbjct: 109 GDPVGQRNYAALHMQGLAGTDADYGIAAEYYRRAAEKGDAPAQDMLSWLLLEGEIMTADP 168

Query: 217 LMALPFYEKSAEQGIADAQYAVSQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLG 276
           L A  + E +AE GIA +   +  ++ +   V  + + KA  W ++AA+ G   AQ  LG
Sbjct: 169 LEARRWAECAAEAGIASSMTRLGMLHHNALGVERDAQ-KAVYWWLKAAERGDADAQAMLG 227

Query: 277 VWLVNGFGGERNLDEGFRWLYGAAQRGNVVAQ 308
                G G  RN      WL  A + G+ +A+
Sbjct: 228 AACHMGAGTIRNGVTALVWLIRATEGGSTLAK 259



 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 22/237 (9%)

Query: 104 QRGEYVQALDKALTRAQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDPVAM 163
           Q       + +AL RAQ GD  +   + E ++R  G+AR                   A 
Sbjct: 39  QTAPVADPMAEALARAQAGDYGSALRIWEPLARA-GVAR-------------------AQ 78

Query: 164 FKFALILMEGKFVTRDKAKADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLL-MALPF 222
                   EG  V  ++  A  ++R AAEAG+   Q N+  + +    G      +A  +
Sbjct: 79  NNIGACFAEGLGVPENRELACKWLRLAAEAGDPVGQRNYAALHMQGLAGTDADYGIAAEY 138

Query: 223 YEKSAEQGIADAQYAVSQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVWLVNG 282
           Y ++AE+G A AQ  +S +     ++ T    +AR W   AA+AG  ++   LG+   N 
Sbjct: 139 YRRAAEKGDAPAQDMLSWLLLE-GEIMTADPLEARRWAECAAEAGIASSMTRLGMLHHNA 197

Query: 283 FGGERNLDEGFRWLYGAAQRGNVVAQNKVAHLYVQALGTRPDPVEAAKWYVLSRRAG 339
            G ER+  +   W   AA+RG+  AQ  +        GT  + V A  W + +   G
Sbjct: 198 LGVERDAQKAVYWWLKAAERGDADAQAMLGAACHMGAGTIRNGVTALVWLIRATEGG 254



 Score = 47.4 bits (111), Expect = 5e-10
 Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 12/158 (7%)

Query: 219 ALPFYEKSAEQGIADAQYAVSQIYWSVKDVPTEKKAKARDWLMRAAKAGYDTAQVDLGVW 278
           AL  +E  A  G+A AQ  +   +     VP E +  A  WL  AA+AG    Q +    
Sbjct: 62  ALRIWEPLARAGVARAQNNIGACFAEGLGVP-ENRELACKWLRLAAEAGDPVGQRNYAAL 120

Query: 279 LVNGFGGERNLDEGFRWLY--GAAQRGNVVAQNKVAHLYVQALGTRPDPVEAAKWYVLSR 336
            + G  G  + D G    Y   AA++G+  AQ+ ++ L ++      DP+EA +W   + 
Sbjct: 121 HMQGLAGT-DADYGIAAEYYRRAAEKGDAPAQDMLSWLLLEGEIMTADPLEARRWAECAA 179

Query: 337 RAGLKDP-----RLEDFYLGITDEQQKKA---IEAANR 366
            AG+         L    LG+  + QK     ++AA R
Sbjct: 180 EAGIASSMTRLGMLHHNALGVERDAQKAVYWWLKAAER 217



 Score = 44.3 bits (103), Expect = 4e-09
 Identities = 31/111 (27%), Positives = 50/111 (45%)

Query: 101 GHFQRGEYVQALDKALTRAQNGDASAQTLVAEMMSRGLGIARDEKTAAFWYQQAAEGGDP 160
           G     + ++A   A   A+ G AS+ T +  +    LG+ RD + A +W+ +AAE GD 
Sbjct: 161 GEIMTADPLEARRWAECAAEAGIASSMTRLGMLHHNALGVERDAQKAVYWWLKAAERGDA 220

Query: 161 VAMFKFALILMEGKFVTRDKAKADDFMRRAAEAGNASAQFNWGQILVSENP 211
            A          G    R+   A  ++ RA E G+  A+   G +  S +P
Sbjct: 221 DAQAMLGAACHMGAGTIRNGVTALVWLIRATEGGSTLAKPFMGPVRDSLSP 271