Pairwise Alignments

Query, 429 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  108 bits (270), Expect = 3e-28
 Identities = 99/375 (26%), Positives = 162/375 (43%), Gaps = 11/375 (2%)

Query: 2   SRNLLPVFALLSSTLFLFLGNGLQGLILPMRGSAEGYSNEILGFLGTSWAAGFVIGCFVA 61
           +R  +PV AL   TL+      L  L+ P+        +++  +L + + AG + G  VA
Sbjct: 9   NRIAVPVIAL---TLYAIAAGYLMSLV-PLMLPHYQLESDLASWLASVFYAGLLAGALVA 64

Query: 62  PAIVRRAGHVRAFGSFVALVCLTVLMTGLVVDDVWWITLRALTGFCTAGTSMIIESWLNE 121
              V R GH +AF   ++L+ L++++  L+     W+  R + G   AG  +++ESWL  
Sbjct: 65  EPFVNRLGHRKAFVWCLSLLQLSIVVMPLLPYASVWLLARLVAGIAVAGIFVVVESWL-L 123

Query: 122 RATNESRGMIFSLYIAITLLGVVAGQMIVPMGDVSNTSLFMICGIIYCIAILPATLSKAA 181
               + R     +Y+     G   GQM +    V+    F+    +  IA +      + 
Sbjct: 124 HGDEQGRAKRLGIYMVSLYGGTALGQMAIGQLGVAGAVPFIAITTLLLIASIVLMYVDSD 183

Query: 182 SPQPLQKVKLDLPALYRNSPVSFVGILMIGIANGAYGTLGAVFGARAGLDPTMIAIMVSV 241
            P   Q   L L  +++ S  + +G L+ G+  GA   L  V  A  G+  T +  ++++
Sbjct: 184 QPSTQQASSLSLRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDLGNLMAL 243

Query: 242 TIFVGALAQFPAGRLSDRIDRRYVLAGLAGLGAVAGLAVAAVQPHEVYVLIPMIAIYGAA 301
            I  G   Q     LS  + R   +A    LG  A      V    + VL   + I G A
Sbjct: 244 VILGGMAVQPLVPWLSKFLGRTLQMALFCLLGTAA--ITLTVFDDSLLVLGVSLFILGMA 301

Query: 302 ANALYPIAVAHANDFAASEDFVKVSGGLLLLYGIGTIIGPTLGGAVM-TYSGPYALFFVT 360
             ALYPIA+    D   +   V  +  +LL Y +G+++GP L    M    G  A  F  
Sbjct: 302 TFALYPIAINLGCDKLDASYIVSATQVMLLSYSVGSVVGPVLADCFMQDRHGLMAYLFAI 361

Query: 361 AVAHVLITAYAIIRS 375
            +A  L   Y +I+S
Sbjct: 362 LLATCL---YMLIKS 373