Pairwise Alignments

Query, 346 a.a., Holliday junction DNA helicase RuvB from Agrobacterium fabrum C58

Subject, 447 a.a., recombination factor protein RarA from Klebsiella michiganensis M5al

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 69/257 (26%), Positives = 105/257 (40%), Gaps = 43/257 (16%)

Query: 21  LRPQSLDDFTGQAEARANLKVFIEAAKNRGEALDHVLFVGPPGLGKTTLAQIMAKELGVN 80
           +RP++L  + GQ    A  K    A +     L  ++  GPPG GKTTLA+++A+    +
Sbjct: 20  MRPENLAQYIGQQHLLAPGKPLPRAIE--AGHLHSMILWGPPGTGKTTLAEVIARYASAD 77

Query: 81  FKSTSGPV-----IAKAGDLAALLTNLEERDVLFIDEIHRLNPAVEEILYPAMEDFQLDL 135
            +  S        I +A + A    N   R +LF+DE+HR N + ++   P +ED  +  
Sbjct: 78  VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITF 137

Query: 136 IIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIPVRLAFYTVDELELIV---- 191
           I   G    +   +L+   L  A   L                L   T D++E ++    
Sbjct: 138 I---GATTENPSFELNSALLSRARVYL----------------LKSLTSDDIEQVLSQAM 178

Query: 192 ---RRGARLMGLNMTDGGAREIARRARGTPRIAGRLLRRVRDFAE-------VARAEAVT 241
               RG     + + D   + IA    G  R A   L  + D AE       V + E +T
Sbjct: 179 SDKTRGYGGQNIVLPDETRKAIADLVNGDARRALNTLEMMADMAESDASGNRVLKVELLT 238

Query: 242 REIADEALTRLLVDNMG 258
            EIA E   R   DN G
Sbjct: 239 -EIAGERSARF--DNKG 252