Pairwise Alignments

Query, 380 a.a., tRNA-specific 2-thiouridylase MnmA from Agrobacterium fabrum C58

Subject, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

 Score =  197 bits (501), Expect = 4e-55
 Identities = 123/369 (33%), Positives = 200/369 (54%), Gaps = 28/369 (7%)

Query: 1   MSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCETLGIP 60
           MSGGVDSSV A +LK++GY V G+ ++ ++          C A +D+ DA+ VC+ LGIP
Sbjct: 18  MSGGVDSSVSAYLLKQQGYQVEGLFMKNWEED---DNEEYCTAAEDLADAQAVCDKLGIP 74

Query: 61  HYVLDYEARFRETVINPFAEAYAMGETPIPCVACNQTVKFADLLATAQE-LGADALATGH 119
            + +++ A + + V   F   Y  G TP P + CN+ +KF   L  A E L AD +A GH
Sbjct: 75  LHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLDADYIAMGH 134

Query: 120 YIRSRPNPVSGQPGRRALYRPIDSDRDQSWFLFATTQEQIDYLRFPLGGLSKAETRALAE 179
           Y+R R  P +G+  +  + R +D ++DQS+FL+  + EQ+    FP+G L K E R +AE
Sbjct: 135 YVR-RTFPQNGE--KPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKPEVRRIAE 191

Query: 180 EMGLVVAKKADSQDICFVPQGKYTDIINKLKPNAALAGDIVHLDGRVLGRHDGIVHYTIG 239
           E GL+ AKK DS  ICF+ + K+TD +++  P  A  G I   +G+V+G H G++++T+G
Sbjct: 192 EQGLITAKKKDSTGICFIGERKFTDFLSRYLP--AQPGKIETPEGKVIGEHQGLMYHTLG 249

Query: 240 QRRGIGV-----ATGEPLYVVHLDARGRRVIVGPREA----LETRRVYLRDMNWLGDGAL 290
           QR+G+ +     ++ +P YV   D + R V++  + A    L++  +    ++W+    +
Sbjct: 250 QRKGLHIGGMKESSEQPWYVADKDLK-RNVLIAVQGADHPLLKSHGLVAAQLHWVDRTPI 308

Query: 291 AADAGQGFTCFAKVRSTRPPTE-AVLHADENGIYVDLMTGEAGVAPGQACVLYSAPGPDA 349
                +   C  K R  +      ++   ++ I V     +  V PGQ+ V Y       
Sbjct: 309 T----EPVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQG----E 360

Query: 350 RVYGGGFID 358
              GGG I+
Sbjct: 361 ICLGGGIIE 369