Pairwise Alignments

Query, 681 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 779 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  124 bits (311), Expect = 2e-32
 Identities = 81/227 (35%), Positives = 126/227 (55%), Gaps = 9/227 (3%)

Query: 35  VLDRDGKLLRAFATPDGRWRLKTTAAEVDPQFLRMLVAYEDQRFYDHHGVDPWALLRSAW 94
           V   D KL+  F       R     A++ P F+  L++ ED  F +H+GVDP +L+R+A 
Sbjct: 15  VYSSDNKLIAEFGEMR---RTPIRFADIPPNFINALLSAEDDNFANHYGVDPGSLMRAAS 71

Query: 95  QLASNGRIVSGASTLSMQVARLIEPRADRSFSAKFLQAARALQIERRLDKAEILDLYLNI 154
           QL  +G I SG ST++MQVA+     ++RSFS K  +   ALQIER+L K EIL+LY+N 
Sbjct: 72  QLIKSGHIQSGGSTITMQVAKNFFLTSERSFSRKTTEILLALQIERQLTKDEILELYVNK 131

Query: 155 APYGGNLEGVRAASLAWFGKEPGRLDTAEAALMVALPQLPEKRRPDRFPEAAKQARERVL 214
              G    G+ AA+  ++GK    +  A+ A++  LP+ P +  P   P  +K+ R+ +L
Sbjct: 132 IYLGNRAYGIEAAAQVYYGKSIRDVSLAQMAMIAGLPKAPSRFNPLANPARSKERRDWIL 191

Query: 215 QRLAVERVVGEGEAERAALAAVPVNRR-DLPS---YAPHMAVAARAK 257
            R+   ++    EA+  A    P+N    +P+    AP++A  ARA+
Sbjct: 192 GRM--YKLGKISEADYTAAINEPLNASYHVPTPEVNAPYIAEMARAE 236



 Score = 65.9 bits (159), Expect = 7e-15
 Identities = 71/297 (23%), Positives = 119/297 (40%), Gaps = 70/297 (23%)

Query: 294 AIVMADAQTGDILAEVGSADYLDTARRGFVEMSRAVRSPGSTLKPFIYGLAFEDGLVGQE 353
           A+V  D Q G I + VG   +    +  +    +A R PGS+ KPF+Y  A ++G     
Sbjct: 390 ALVSLDPQDGAIRSLVGGFAF---EQSNYNRALQAKRQPGSSFKPFVYSAALDNGYTA-A 445

Query: 354 TIIEDRPADF------SGYRPRNFDMHYQGDVSIRQALQLSLNVPAVKLLDAVSPSALMV 407
           +++ D P  F        +RP+N    + G + +R+AL  S N+ +++LL A+     + 
Sbjct: 446 SLVNDAPIVFVDEYLDKVWRPKNDTNTFLGPIRLREALYKSRNLVSIRLLQALGVDRTID 505

Query: 408 RFRRAGV-KLVLPANEAPGLAIALGGAGISLVDLVQLYAGLAGSG--------------- 451
              + G  K  LP N    L++ALG A ++ +++   ++  A  G               
Sbjct: 506 YISKFGFNKQDLPRN----LSLALGTATLTPMEIATGWSTFANGGYKITPYIIDKIESRN 561

Query: 452 -------DPMRLGDG-----------------------VRTVPERLEGDRLFSHAAIWNV 481
                  +P R+  G                         T P   +   +         
Sbjct: 562 GETLFVANPPRVPTGEQASDGLAAPSTETFTVNATPGEATTAPGLPQAPAIAERIVDGRT 621

Query: 482 TDILSGVLP---PLGMKQRGIAY-------KTGTSYGYRDAWSVGYDGRHVIGIWVG 528
           T IL+ +L     LG  +R +A        KTGT+   +DAW  GY+  +V  +W G
Sbjct: 622 TYILNSMLQDVIKLGTGRRALALGRTDLAGKTGTTNESKDAWFSGYNADYVTTVWTG 678