Pairwise Alignments

Query, 681 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 740 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  138 bits (348), Expect = 8e-37
 Identities = 150/525 (28%), Positives = 233/525 (44%), Gaps = 70/525 (13%)

Query: 60  AEVDPQFLRMLVAYEDQRFYDHHGVDPWALLRSAWQLASNGRIVSGASTLSMQVAR-LIE 118
           ++  P   + L+A ED RFY H G+DP+   R+      +G +  GASTL+ Q+AR L  
Sbjct: 211 SDFSPVLPKALLASEDSRFYWHLGIDPYGTARAILTNFRSGEVREGASTLTQQIARSLFS 270

Query: 119 PRADR--SFSAKFLQAARALQIERRLDKAEILDLYLNIAPYGGNLEGVRAASLAWFGKEP 176
               R  S   K  +A  AL++E    K E+L  YLN   Y G   G   A+  +FGK  
Sbjct: 271 DYVGREDSIGRKVREAILALKLEFFYSKDELLRTYLN-RVYLGVGYGFEDAAQIYFGKSA 329

Query: 177 GRLDTAEAALMVALPQLPEKRRPDRFPEAAKQARERVLQRLAVERVVGEGEAERAALAAV 236
             L T+EAAL+V L   P    P     AA++ +  V++R+    ++ E EA  A  + V
Sbjct: 330 RDLSTSEAALLVGLLPSPNGFSPCTNLAAAQRQKNGVIERMQSLGLISEEEARTARRSPV 389

Query: 237 PV--------NRRDLPSYAPHM----------AVAARAKFQNAGEVRSTLRLPIQRELEG 278
            +        +R   P Y   +           V     F     +   ++   ++ L+ 
Sbjct: 390 TIKPEACQTSSRVTAPYYYGAVVEELAQLVGDTVVEEGNFAVETSLNPAMQTAAEQSLQS 449

Query: 279 -VARHAAEKLGDKVSVAIVMADAQTGDILAEVGSADYLDTARRGFVEMSRAVRSPGSTLK 337
            +A+ A  K G     AIV  D++ G+I A VG  DY  +    F   ++A R PGST K
Sbjct: 450 LLAQTAGVKQG-----AIVTIDSRNGEIRALVGGVDYQASQ---FDRATQAYRQPGSTFK 501

Query: 338 PFIYGLAFEDGLVGQETIIEDRPADFSGYRPRNFDMHYQGDVSIRQALQLSLNVPAVKLL 397
            F Y  A E G+       +  P  + G + R  +    G + + +AL  S N  A+++ 
Sbjct: 502 VFAYAAALEQGISAGRP-YDCSPLVWQGQQFRGCE-RSSGSIDLARALAQSENAVALRVA 559

Query: 398 DAVSPSALMVRFRRAGVKLVLPANEAPGLAIALGGAGISLVDLVQLYAGLAGSG--DP-- 453
             V   A++   R+ G+K  L     PGL   LG + ++L+++   +A +A  G  +P  
Sbjct: 560 REVGLDAVVQMARKFGIKADL--QPVPGL--VLGQSEVTLLEMTSAFAAIANEGRWNPPH 615

Query: 454 --MRLGDGVR--------------TVPERLEGDR-LFSHAAIWNVTDIL-------SGVL 489
              R+ D  R               V ++   DR + S A    +T +L       +G  
Sbjct: 616 AIRRIYDSSRCTTAEQRRSCTLTFDVQQQPRRDRVVISAATAATLTAMLQQAVSSGTGGA 675

Query: 490 PPLGMKQRGIAYKTGTSYGYRDAWSVGY-DGRHVI-GIWVGRADN 532
             +G    G A KTGT+    D W VG+   RH++ G+W+G  DN
Sbjct: 676 AAIGY---GAAGKTGTTNDGVDLWFVGFVPSRHLVTGVWLGNDDN 717