Pairwise Alignments
Query, 555 a.a., siderophore biosynthesis protein from Agrobacterium fabrum C58
Subject, 4146 a.a., Non-ribosomal peptide synthetase modules, pyoverdine from Pseudomonas fluorescens FW300-N2E2
Score = 239 bits (610), Expect = 2e-66
Identities = 150/425 (35%), Positives = 217/425 (51%), Gaps = 20/425 (4%)
Query: 13 AIENIYPLSPMQEGLLFHSIATPDEGVYVPQIVLQLRGAVDPQIMHDCWSEMVSRHAVLR 72
AI++IYPLSPMQ+G+LFH++ G Y+ Q+ L + G +DPQ W +V H +LR
Sbjct: 3096 AIDDIYPLSPMQQGMLFHTVLEQGSGDYINQMRLDVEG-IDPQRFRAAWQAVVDAHDILR 3154
Query: 73 TTFHWE-ERDEPFQVVHSDAGLAWSQLDWSGIDAEERQKRLGALLSTNRRQAFDLKTAPL 131
+ F W+ + +P Q+V + + LDWSG + L L R Q DL APL
Sbjct: 3155 SGFFWQGDLAQPVQIVQRQVEVPFRVLDWSG--RTDIDDALQTLADAERAQGVDLTRAPL 3212
Query: 132 IRLQWIDYGGENSRLVLQYHHIILDGWSAGRIVEDAFRTYQRRCGSTRPPLAAPRPYADY 191
+RL + + L+ HHI++DGWS+ +++ + + Y R S P Y DY
Sbjct: 3213 MRLVLVRTASDRHHLIYTNHHILMDGWSSAQLLGEVLQHY--RGDSVARPAGR---YRDY 3267
Query: 192 IAWLKSRKREATRAFWTDYTTKIEMPCRMT---RDATGGEADFSSHHLTCDPAVSTQAAK 248
IAWL+ + A+ AFWT ++E P R+ +A H D A++ +
Sbjct: 3268 IAWLQRQDEAASEAFWTPALRRLETPTRLADVMAKPAQAQAGHGDHVQVLDEALTRRLEA 3327
Query: 249 LCRDMGITPNILLQAALAIVIARKTGSRHVVFGATTAGRPPELQGVENMVGLFINTLPVC 308
R +T N L+QAA +++ R TG V FGAT AGRP ++ G+E +GLFINTLPV
Sbjct: 3328 FARASKVTVNTLVQAAWLLLLQRYTGRDTVAFGATVAGRPADVPGIEQQIGLFINTLPVI 3387
Query: 309 IDVE-NGSLAPWLQRLQQRQSACAEHDYLPLREIQ--AGRG--DLFDCLLVFENYPVPRD 363
SL WLQ +Q + A E ++ L +IQ AG+G LFD LLVFENYP+ +
Sbjct: 3388 ASPRAEQSLDSWLQTVQGQNLALREFEHTALLDIQRWAGQGGETLFDSLLVFENYPIAQA 3447
Query: 364 ITAEATFAVT--GVEVDEWTHYPLTLFAVADAAKISISAHYDRRRIAEQETEAFLHELGA 421
+ A + V E T+YPLTL D ++S+ Y R L
Sbjct: 3448 LEQGAPDGLRFGPVATQEQTNYPLTLLVGLD-RQLSVHMSYQRASFEPASVARLAAHLAQ 3506
Query: 422 TIGEM 426
+G+M
Sbjct: 3507 LLGQM 3511
Score = 231 bits (588), Expect = 6e-64
Identities = 177/558 (31%), Positives = 260/558 (46%), Gaps = 48/558 (8%)
Query: 12 SAIENIYPLSPMQEGLLFHSIATPDEGVYVPQIVLQLRGAVDPQIMHDCWSEMVSRHAVL 71
+AIE+IYPLSPMQ+G+LFH++ G Y+ Q+ + + G +DP+ W + H +L
Sbjct: 1582 AAIEDIYPLSPMQQGMLFHTLYEQGTGTYINQLCVDVDG-LDPERFRAAWQATLDAHEIL 1640
Query: 72 RTTFHWE-ERDEPFQVVHSDAGLAWSQLDWSGIDAEERQKRLGALLSTNRRQAFDLKTAP 130
R+ F W+ E E Q++H L ++ LDW G + + L + + + FDL A
Sbjct: 1641 RSGFIWQGELQEQLQIIHRRLALPYTLLDWRG--RNDVAQALKDFTAADLAKGFDLTQAG 1698
Query: 131 LIRLQWIDYGGENSRLVLQYHHIILDGWSAGRIVEDAFRTYQRRCGSTRPPLAAPRPYAD 190
L+R+ I E L+ HHI++DGWS+ +++ + + Y +PP R YAD
Sbjct: 1699 LLRVTLIQLSDERHHLIFTNHHILMDGWSSAQMLGEVLQRY----AGQQPPRPVSR-YAD 1753
Query: 191 YIAWLKSRKREATRAFWTDYTTKIEMPCRMTRDATGG-----EADFSSHHLTCDPAVSTQ 245
YI WL+ + + FW ++ P + A E+ + H T D + +
Sbjct: 1754 YIQWLQRQDTALSETFWLGQLADLQEPTLLANAAAASAEVRSESAHALRHYTLDAPRTGR 1813
Query: 246 AAKLCRDMGITPNILLQAALAIVIARKTGSRHVVFGATTAGRPPELQGVENMVGLFINTL 305
R +T N L+QAA +++ R TGS V FG T AGRP EL G+E VGLFINTL
Sbjct: 1814 LNAFARQQKVTVNTLVQAAWLLLLQRYTGSDCVAFGTTVAGRPAELVGIEQQVGLFINTL 1873
Query: 306 PVCIDVE-NGSLAPWLQRLQQRQSACAEHDYLPLREIQ----AGRGDLFDCLLVFENYPV 360
PV + ++A WL +Q R + E ++ PL IQ G G LFD LLVFEN+P+
Sbjct: 1874 PVIAGSRPDQTVAAWLAAVQARNLSLREFEHTPLANIQRWAGQGGGALFDSLLVFENFPI 1933
Query: 361 PRDITAEATFAVTGVEV--DEWTHYPLTLFAVADAAKISISAHYDRRRIAEQETEAFLHE 418
+ V EV + THYPLTL V +++ +D+ H
Sbjct: 1934 SAALQRGTAQGVVFGEVANQDQTHYPLTL-GVTLGETLALHMSFDQ-----------AHF 1981
Query: 419 LGATIGEMAGGIAMVPHVSAEDARTANLAKPALPSGTETPSDQ----PLPATAWTETEKR 474
ATI ++ + + AE A L + AL S E + Q P P +R
Sbjct: 1982 SVATIERLSAQLLHLLERFAESAE-RRLGEIALASAEEHQAQQAANHPQPYPTDIAVHQR 2040
Query: 475 IARIWA-----EVLKVDAQRNTDNFFDLGGHSLLAARVVNRVRREFAINFPVKVLFDRPV 529
IA + A + D QR + D + L A V V E + V + V
Sbjct: 2041 IAHLAALKPHSTAVIFDGQRFSYGDIDRRANQLAHALVARGVGPETRVG--VALPRSEGV 2098
Query: 530 LAAFAAFIDALKATAAPV 547
+ A A LKA AA V
Sbjct: 2099 IVALLA---VLKAGAAYV 2113
Score = 108 bits (271), Expect = 3e-27
Identities = 86/339 (25%), Positives = 146/339 (43%), Gaps = 18/339 (5%)
Query: 15 ENIYPLSPMQEGLLFHSIATPDEGVYVPQIVLQLRGAVDPQIMHDCWSEMVSRHAVLRTT 74
E+ LS Q+ + F PD G Y ++L G + + ++ +V+RH LRT
Sbjct: 47 EDRQALSYAQQRMWFLWQLEPDSGAYNLPGAVRLSGVLSLPALEQAFASLVARHETLRTV 106
Query: 75 FHWEERDEPFQVVHSDAGLAWSQLDWSGIDAEERQKRLGALLSTNRRQAFDLKTAPLIRL 134
F + D QV S A L D+S I A+ER++ + + FDL PL+R+
Sbjct: 107 FQRQADDRLLQVPAS-APLVIDHADFSAIPADEREQAVRLAAEAQSMRPFDLACGPLLRV 165
Query: 135 QWIDYGGENSRLVLQYHHIILDGWSAGRIVEDAFRTYQRRCGSTRPPLA-APRPYADYI- 192
+ + + L+L HHI+ DGWS ++++ R Y P LA P Y+DY
Sbjct: 166 ELLKLDEQEHVLLLTLHHIVSDGWSMNVLIDEFIRFYDAHEAGVAPQLADLPIQYSDYAL 225
Query: 193 ---AWLKSRKREATRAFWT----DYTTKIEMPCRMTRDATGGEADFSSHHL--TCDPAVS 243
WL++ + + +W D +E+P R + L + +
Sbjct: 226 WQRRWLEAGELQRQLDYWQAQLGDEHPVLELPLDYPRPML---PSYRGRRLEQVVEAELV 282
Query: 244 TQAAKLCRDMGITPNILLQAALAIVIARKTGSRHVVFGATTAGRPPELQGVENMVGLFIN 303
Q + R G+T +LL +I++ R TG + G A R Q +E ++G F+N
Sbjct: 283 EQLRGVARQQGVTLFMLLLGTFSILLHRYTGQDDLRVGVPVANR--NRQEIEGLIGFFVN 340
Query: 304 TLPVCIDVE-NGSLAPWLQRLQQRQSACAEHDYLPLREI 341
T + + ++ L L+ +++ H LP +
Sbjct: 341 TQVLRVQLDGQARLGDLLRDVKETALGAQAHQDLPFERL 379
Score = 65.9 bits (159), Expect = 3e-14
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 449 PALPSGTETPSDQPLPATAWTET---------EKRIARIWAEVLKVDAQRNTDNFFDLGG 499
P P+G P P T +T E+++A IWA+VL V+ D+FF+LGG
Sbjct: 4024 PLTPNGKLDRKALPAPETGLLQTGYVAPASELEQQVAAIWAQVLTVERVGLNDHFFELGG 4083
Query: 500 HSLLAARVVNRVRREFAINFPVKVLFDRPVLAAFAAFID 538
HSLLA V+R+ E + +++F PVL F A +D
Sbjct: 4084 HSLLAVNAVSRLALELGLTLTPQLIFQHPVLGDFVAQLD 4122
Score = 55.5 bits (132), Expect = 4e-11
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 446 LAKPALPSGTETPSDQPLPATAWTETEKRIARIWAEVLKVDAQRNTDNFFDLGGHSLLAA 505
L + ALPS + Q A +E E+ IA IW +VLK++ TDNFF+LGG S+++
Sbjct: 1016 LDRKALPSADASQLQQAFIAPR-SELERGIAAIWQDVLKLEQVGLTDNFFELGGDSIISI 1074
Query: 506 RVVNRVRREFAINFPVKVLFDRPVLAAFAA 535
+VV+R R+ I+F + LF + A+
Sbjct: 1075 QVVSR-SRQAGIHFTPRDLFQHQTVQGLAS 1103
Score = 53.5 bits (127), Expect = 2e-10
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 472 EKRIARIWAEVLKVDAQRNTDNFFDLGGHSLLAARVVNRVRREFAINFPVKVLFDRPVLA 531
E+++A IW +VLK+ DNFF+LGG S+++ +VV+R R+ I F K LF +
Sbjct: 2552 EQQLAAIWQDVLKLGQVGLQDNFFELGGDSIVSIQVVSRA-RQVGIQFTPKDLFQHQTIE 2610
Query: 532 AFAAFIDALKATAAPVDE 549
A AA + A P+D+
Sbjct: 2611 ALAAVVQT-GAPLQPIDQ 2627
Score = 49.3 bits (116), Expect = 3e-09
Identities = 65/263 (24%), Positives = 100/263 (38%), Gaps = 35/263 (13%)
Query: 64 MVSRHAVLRTTFH-----WEERDEPFQVVHSDAGLAWSQLDWSGIDAEERQKRLGALLST 118
+V+ H LR+ F W P + D L W+ + S + ++ L
Sbjct: 1167 LVAHHDALRSRFTETPTGWRADVAPVAI---DPELLWTADNLSAAELQD--------LCA 1215
Query: 119 NRRQAFDLKTAPLIRLQWIDYGGENSRLVLQYHHIILDGWSAGRIVEDAFRTYQRRCGST 178
+++ DL+ PL+R + + RL+L HH+ +DG S ++ED R YQ+ S
Sbjct: 1216 KAQRSLDLQKGPLLRGVLANMADGSQRLLLAVHHLAVDGVSWRILLEDLQRAYQQ--ASA 1273
Query: 179 RPPLAAPRPYADYIAW-------LKSRKREATRAFWTDYT--TKIEMPC---RMTRDATG 226
L P + Y AW + A FW +++P + +R +
Sbjct: 1274 GATLRLPAKTSAYKAWGEHLQAYASTETLRAELTFWQQQLQGAVVDLPWDNPQGSRQSRY 1333
Query: 227 GEADFSSHHLTCDPAVSTQAAKLCRDMGITPNILLQAALAIVIARKTGSRHVVFGATTAG 286
+ S T + QA R N LL ALA VI R TG + G
Sbjct: 1334 AKVLHSRLDKTLTQQLLQQAPAAYRTQ---VNDLLLTALARVICRWTGHADTLIQLEGHG 1390
Query: 287 RPPELQGVE--NMVGLFINTLPV 307
R V+ VG F + PV
Sbjct: 1391 REELFSDVDLTRTVGWFTSLFPV 1413
Score = 41.6 bits (96), Expect = 6e-07
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 6/157 (3%)
Query: 29 FHSIATPDEGVYVPQIVLQLRGAVDPQIMHDCWSEMVSRHAVLRTTFHWEERDEPFQVVH 88
F + PD + ++L+ A+D Q + ++ H LR F E+ E + +
Sbjct: 2643 FFAQPIPDRHHWNQSVMLKPTQALDAQALEQALGALIEHHDSLRLDFI--EQGEGWTARY 2700
Query: 89 SDA-GLAWSQLDWSGIDAEERQKRLGALLSTNRRQAFDLKTAPLIRLQWIDYGGENSRLV 147
D A L W A+ + + L +++ L PL+R + RL+
Sbjct: 2701 RDVEAQAAGTLLWQADVADLAELEV---LGNQAQRSLQLDGGPLLRALLANLADGTQRLL 2757
Query: 148 LQYHHIILDGWSAGRIVEDAFRTYQRRCGSTRPPLAA 184
L HH+++DG S + ED Y++ T L A
Sbjct: 2758 LIVHHLVVDGVSWRILFEDLQSAYRQMLAGTAVQLPA 2794