Pairwise Alignments

Query, 754 a.a., vgrG protein from Agrobacterium fabrum C58

Subject, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (615), Expect = 2e-67
 Identities = 183/594 (30%), Positives = 278/594 (46%), Gaps = 28/594 (4%)

Query: 106 YALTIRPQMWLLSRRSDCRIWMDKTAVEIVETLFSEHGIPAPDTSGIISPPPAQH-YSVQ 164
           Y LT+ P +  LS R + RI+  +T  EI+  L  E GI   D +  +     Q  + VQ
Sbjct: 98  YQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGIN--DYAFALKRDGVQREFCVQ 155

Query: 165 FNETDLDYLTRRFEEDGLFYWFSHEDGSHKLHVADSASGWLG-PSPAAQGEGTVRLAQGS 223
           + E+D+D+L R   E+GL Y F HE G H L+ +D++      P P         L  G+
Sbjct: 156 YRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLPEPIPYNA----LVGGA 211

Query: 224 SDRNHINDWARRFSYVSGQRAGADWNFETPGMVPGTMTPSLVQMPDATKRELYEYPARIK 283
            D  +I+    R      +    D++F+ P                 T+ + ++ P R K
Sbjct: 212 IDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELDYQQTRYQHFDAPGRYK 271

Query: 284 TVEEAERAQKLRTQSIEADHDRVFGSSTTRILEAGRRFTPFEVAHPEHAYEEHVIVRASH 343
                    ++R   +        G S   +L AG +F   E   P     + V+V  +H
Sbjct: 272 DDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPA-MNRDWVVVSINH 330

Query: 344 SIVD---LSYETNSNEPEYRNHFEAIPARVPLTPHRSTKRPRIEGTQVAIVAGPEGEEIH 400
                  L  +  S    Y N F  IP  +        K P+++G  +A V GPEGEEI 
Sbjct: 331 QGEQPQALQEDGGSGATTYSNQFSLIPGHLHWRAEPQPK-PQVDGPMIATVVGPEGEEIF 389

Query: 401 PDQYGRIKLWFPWDRKAKKDGTDTCWVRVSQAWGGGTWGAQVIPRIGMEVMVAFVDGDPD 460
            D++GR+K+ FPWDR +  +   +CWVRVSQ W G  +G   IPRIG EV+V F++GDPD
Sbjct: 390 CDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNGDPD 449

Query: 461 KPLVIGVVNNPANSVPYDLPANKTRMVLRSNSHKGDGFNEITFEDEAGKENQFFHAQKDQ 520
           +P++ G   +  N+ PY LP +KT+ VLR+ +H+G+GFNE++FED+AGKE  + HAQKD 
Sbjct: 450 QPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQGEGFNELSFEDQAGKEQIYLHAQKDF 509

Query: 521 TTRVLNDRTKRIDRHEVASVGGNRAVEVSGNQKHEIGGSVNTVVGGTGPMAMMAMAGVQA 580
              + ND T  I      +V  ++  ++  NQ   +       V  TG   +     +  
Sbjct: 510 DGLIENDHTTVIRHDHHLTVENDQFTQIKHNQHLTVEWESREAV--TGEQVLSIEGSLHV 567

Query: 581 LSGQTAGLLSQAAQIAGSGGPGVAAFATTLASSALGFLGAGGLSSREGV-VSGPSPRADA 639
            +G+   +     +I    G  V   A +  +   G  G+       GV +SG     ++
Sbjct: 568 KTGK-VWVNEAGTEIHVKAGQKVVIEAGSEITVKAG--GSFVKVDPAGVHLSGALVNLNS 624

Query: 640 GTALAGSGSGVGSDASGLFP-LPGIMNTIVSTFKSDSV---GVARAEQIGVSKV 689
           G + AGSGSG G    G  P LPG +   V+     ++    + +AEQ  V  V
Sbjct: 625 GGS-AGSGSGFG----GAMPALPGGLEPAVALAPPQTISYQALLQAEQANVPAV 673