Pairwise Alignments

Query, 389 a.a., penicillin-binding protein dacf precursor from Agrobacterium fabrum C58

Subject, 316 a.a., D-alanyl-D-alanine endopeptidase from Vibrio cholerae E7946 ATCC 55056

 Score = 76.6 bits (187), Expect = 9e-19
 Identities = 76/252 (30%), Positives = 113/252 (44%), Gaps = 17/252 (6%)

Query: 50  NANPKMVVDVKTGKVISHQEAFRKWYPASLTKLMTAYIAFSQMKAGKISPQTEVVMS-KK 108
           +AN  +V+D+KT ++I           AS+TKLMTA +        K+    ++ ++ K 
Sbjct: 46  SANSALVIDLKTNEIIYSNNPDAVKPIASVTKLMTAIVTLD----AKLPMDAKLPITIKD 101

Query: 109 AADQPASKMYFKPGQKLTMDSALKLLLIKSANDIAVAIAETIGGTSDNFVAQMNAQAQRL 168
           A +        K G +++    L L L+ S N  A ++A    G    F+  MNA+A+ L
Sbjct: 102 AKEMKGVHSRVKIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNAKAKAL 161

Query: 169 GMSSTHYVNPNGLPGKGQYTTARDLALLALIIKREFPEYAHYFSLE--GVTTGKKNYA-- 224
           GM +T +V P GL  K   +TARDL +L L   +++P      + +   VT  K  Y   
Sbjct: 162 GMKNTRFVEPTGLSAK-NVSTARDLVVL-LKASKKYPLLGKLSATDKKTVTFSKPRYTLD 219

Query: 225 --NFNMLVGRFE-GADGMKTGFICASGFNQVASAVRNGRSVITVVL---GADSLAGRTDQ 278
             N N LV       D  KTGF  A+G   V       R V  VVL   G  S  G  ++
Sbjct: 220 FRNTNRLVHNDNWKIDLTKTGFTNAAGHCLVMRTQMGRRQVAFVVLDTKGKLSPVGDANR 279

Query: 279 SADLLQMGLTAP 290
               ++ G   P
Sbjct: 280 LRTWIETGKVTP 291