Pairwise Alignments

Query, 713 a.a., methylmalonyl-CoA mutase from Agrobacterium fabrum C58

Subject, 1155 a.a., methylmalonyl-CoA mutase family protein from Dyella japonica UNC79MFTsu3.2

 Score =  213 bits (542), Expect = 4e-59
 Identities = 181/586 (30%), Positives = 276/586 (47%), Gaps = 82/586 (13%)

Query: 34   EVKPLYTAD--DLQDVSHLNSLPGFAPFTRGPRATMYAGRPWTIRQYAGFSTAEASNA-F 90
            +V P  T D  DL       +LPG+ P+T G       G   T R +AG  T E +N  F
Sbjct: 572  KVSPPRTKDWGDLVRFLMRENLPGYYPYTGGVYPYRRTGEDPT-RMFAGEGTPERTNRRF 630

Query: 91   YRKALAAGQQGVSVAFDLATHRGYD-SDHPRVEGDVGKAGVAIDSVEDMKILFDGI---- 145
            +  +       +S AFD  T  G D +  P + G +G +GV + +++DMK L+ G     
Sbjct: 631  HYLSQGGAATRLSTAFDSVTLYGEDPAPRPDIYGKIGNSGVNVATLDDMKKLYSGFDLSA 690

Query: 146  PLEKVSVS----------MTMNGAVIPVLANF--------------IVAGEEQGVPRAA- 180
            P   VS++          M MN A+   +                 I A +  G PR + 
Sbjct: 691  PSSSVSMTINGPAPIILAMFMNTAIDQNIEKHLKADPARWAEAQQKIAALQSHGGPRYSG 750

Query: 181  -------------------------------------LSGTIQNDILKEFMVRNTYIYPP 203
                                                 + GT+Q DILKE   +NT I+  
Sbjct: 751  ELPKGNEGLGLGLLGITGDQLVDAQTYARIKEETLQIVRGTVQADILKEDQAQNTCIFST 810

Query: 204  EPSMRIIADIIEYTAK-EMPKFNSISISGYHMQEAGATLVQELAFTLADGREYVRAALAK 262
            E ++R++ DI +Y    ++  F S+SISGYH+ EAGA  + +LAFTL++G   V   LA+
Sbjct: 811  EFALRMMGDIQQYFVDHKVRNFYSVSISGYHIAEAGANPISQLAFTLSNGFTIVEYYLAR 870

Query: 263  GLNVDDFAGRLSFFFAIGMNFFMEAAKLRAARLLWSRIMEEFKPQKASSLMLRTHCQTSG 322
            G+++DDFA  LSFFF+ GM+        R AR +W+R M E     A S ML+ H QTSG
Sbjct: 871  GMHIDDFAPNLSFFFSNGMDPEYTVIG-RVARRIWARAMRERYGASARSQMLKYHIQTSG 929

Query: 323  VSLQEQDPYNNIVRTAFEAMSAVLGGTQSLHTNSFDEAIALPTEFSARIARNTQLILQHE 382
             SL  Q+   N +RT  +A+ A+     SLHTN++DEAI  PTE S R A   QLI+  E
Sbjct: 930  RSLHAQEIQFNDIRTTLQALYALFDNCNSLHTNAYDEAITTPTEESVRRAVAIQLIINRE 989

Query: 383  TGVTKVVDPLAGSYYVESLTDELAEKAWALIEEVETLGGMTKAVADGLPKRLIEEAATRR 442
             G+    +P  GS+ V++LTD + E  +   E +   GG+  A+     +  I+E +   
Sbjct: 990  LGLNFNENPWQGSFVVDALTDLVEEAVYREFEAISERGGVLGAMDTMYQRGKIQEESMYY 1049

Query: 443  QAAVDKGEEVIVGVNRYRL-----ETEEDIDVLDIDNAAVRAAQIRRIEETRRRRDGKEA 497
            +     G   ++GVN +       E   +I+++       +  QI  ++   + R+G  A
Sbjct: 1050 EQKKHDGSLPLIGVNTFLPKDHGGEIATEIELIR-STEEEKGQQIDNVQAYAKARNGL-A 1107

Query: 498  TAALEALSEIARSGKGNILEAAVVASRARATVGEISDALRVAFGDH 543
              +L+ L   AR  + N+ E  + A +   ++G+IS AL    G++
Sbjct: 1108 PESLKILQNTARE-RRNVFEQLMEAVKYN-SLGQISHALYDVGGEY 1151



 Score = 41.2 bits (95), Expect = 3e-07
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 2/115 (1%)

Query: 579 GKKPRIMVAKLGQDGHDRGAKVIASAFGDIGFDVLAGPLFQTPAEAAELAVQNKVHVVGM 638
           G+  R + A    DGHD    ++       G +V+     ++  +    A+Q     + +
Sbjct: 17  GRPLRFVTAASLFDGHDAAINIMRRIIQSQGAEVIHLGHNRSVEDVVRAALQEDADAIAL 76

Query: 639 SSLAAGHKTLAPQLVEALKQKGADDIIVV--VGGVIPRQDYQFLLDHGVAAIFGP 691
           SS   GH      +V+ LK+ GA  I V    GG I  ++ + L  +GV  I+ P
Sbjct: 77  SSYQGGHVEYFKYMVDMLKEHGAAHIRVFGGGGGTITPEEIRELQAYGVERIYHP 131