Pairwise Alignments

Query, 414 a.a., transcriptional regulator from Agrobacterium fabrum C58

Subject, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

 Score = 64.7 bits (156), Expect = 5e-15
 Identities = 70/334 (20%), Positives = 133/334 (39%), Gaps = 9/334 (2%)

Query: 14  VRQKNSLSVMAALRLYGSLSHTDMSSFTGLASATVSVITTDLERTGLILRKEQIAAAGRG 73
           ++Q N+  V   +   G +S  D+S  + LA A+++ IT +L    LI       A  RG
Sbjct: 12  IKQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIHETTVQEAISRG 71

Query: 74  RPRILFAPNGAFCHVAIIIISSDSVQYSLVDYAGKLVDRFTEQRITAEKGSFGGSILSGL 133
           RP +    N        + +    +  +L +  G+++          ++      +L  +
Sbjct: 72  RPAVGLQTNNLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEI 131

Query: 134 ARLADRSRIDRHDILQVSISSKGLVDAAAAVLVWSPVLGTEKIDFQQLISQGGRIRVTLN 193
                        +  ++I+  GLV++   +++  P    + +     I +   + V + 
Sbjct: 132 EEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVA 191

Query: 194 NETLLAAKAIWMREQAKDGPKPEALVTLSLGHSIGLGIARSGAGTIEVSAPNFGHMLHL- 252
           N+T   A A  +   ++D    +  V +S+ H +G GI   G   ++    N G + H+ 
Sbjct: 192 NDTRAWALAEKLFGHSQD---VDNSVLISIHHGLGAGIVLDGR-VLQGRHGNIGELGHIQ 247

Query: 253 --ADGALCRCGTRGCIEAYSGFYAILRSAFEAPPQAEPAKFVPVAE--VDKIAASARAGA 308
               G  C CG  GC+E  +   AI           EP+    V E  ++ I A+A  G 
Sbjct: 248 IDPQGKRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGD 307

Query: 309 RMARFAFRTAGLALGNGLSRLFSLHGHMPVFITG 342
            +A    +  G  LG  ++ + +L     + I G
Sbjct: 308 PLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGG 341