Pairwise Alignments

Query, 346 a.a., xylose ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 308 a.a., rhizopine-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 86/272 (31%), Positives = 135/272 (49%), Gaps = 21/272 (7%)

Query: 8   LAGTAVLVSLHTAAIAADLVVGVSWSNFQEERWKTDEAAIKAALDKA------GAKYISA 61
           +A  A+ + L + A  ADL +GVS S F ++ W T    ++ ++DK       G      
Sbjct: 7   IASLALSLMLTSGAALADLKIGVSMSQF-DDTWLT---YLRESMDKKAKSLPDGVTLQFE 62

Query: 62  DAQSSAAKQLTDVESLISQGANALIILAQDSDAIGPAVEKAVAEGIPVVGYDRLIEN--- 118
           DA+S   KQL+ VES ISQ  +ALI+   D+ A     + AVA GIP+V  +R  ++   
Sbjct: 63  DARSDVVKQLSQVESFISQKVDALIVNPVDTAATQRITKAAVAAGIPLVYVNRRPDDPKL 122

Query: 119 -KNAFYITFDNKEVGRLQAAEVF-KVKPEGNYVFIKGSSSDPNADFLFAGQQEVLKAAMS 176
            +    +  D+ E GR+Q   +  K+  +GN V + G  ++ +      G ++VL A   
Sbjct: 123 PEGVVTVASDDLEAGRMQMQYLAEKMGGKGNIVILLGDLANNSTANRTKGVKDVL-AKYP 181

Query: 177 SGKIKNVGEAYTDGWKPENAQKNMEQFLTKNNNKVDAVVASNDGTAGGAIAALAAQGM-A 235
             KI+   +  T  W  +     +  +LT+   +  AVVA+ND  A GA  AL   G   
Sbjct: 182 GIKIE---QEQTGIWLRDKGMTLVNDWLTQ-GREFQAVVANNDEMAIGAAMALKQAGTEK 237

Query: 236 GSVPVSGQDADFAALNRVALGTQTVSVWKDSR 267
           GSV ++G D     LN +  G   VSV++D++
Sbjct: 238 GSVLIAGVDGTPDGLNAIKKGEMAVSVFQDAK 269