Pairwise Alignments

Query, 346 a.a., xylose ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 330 a.a., D-xylose ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score =  243 bits (621), Expect = 4e-69
 Identities = 136/326 (41%), Positives = 197/326 (60%), Gaps = 7/326 (2%)

Query: 7   LLAGTAVLVSLHTAAIAADLVVGVSWSNFQEERWKTDEAAIKAALDKAGAKYISADAQSS 66
           +L+  A LV    + +A ++ +G++  + + ERW+ D     A     GA      A  +
Sbjct: 7   ILSACAALVLFSQSGLAKEIKIGMAIDDLRLERWQKDRDIFVAKAKTLGADVFVQSANGN 66

Query: 67  AAKQLTDVESLISQGANALIILAQDSDAIGPAVEKAVAEGIPVVGYDRLIENKNA-FYIT 125
              Q+  +E++I++G + L+I+  + + +   + +A  EGI V+ YDR+I N +  FYI+
Sbjct: 67  EETQMAQIENMINRGVDVLVIIPYNGEVLSNVIAEAKQEGIKVLAYDRMINNADIDFYIS 126

Query: 126 FDNKEVGRLQAAEVFKVKPEGNYVFIKGSSSDPNADFLFAGQQEVLKAAMSSGKIKNVGE 185
           FDN++VG LQA  + +  P+GNY  + GS  D NA    AGQ +VL   +  GKIK VG+
Sbjct: 127 FDNEKVGELQAQSLVERVPQGNYFLMGGSPVDNNAKLFRAGQMKVLNPLIKDGKIKVVGD 186

Query: 186 AYTDGWKPENAQKNMEQFLTKNNNKVDAVVASNDGTAGGAIAALAAQGMAGSVPVSGQDA 245
            + DGW PENA K ME  LT NNNK+DAVVASND TAGGA+ AL+AQG+AG V +SGQDA
Sbjct: 187 QWADGWLPENALKIMENALTANNNKIDAVVASNDATAGGAVQALSAQGLAGKVAISGQDA 246

Query: 246 DFAALNRVALGTQTVSVWKDSRELGKEAAGIALALAGGKKMTEIKGVTAFDGGPKKVTMQ 305
           D AA+ R+  GTQT++V+K   +L  +AA IA+ L  GK  T     T  +G   K  + 
Sbjct: 247 DLAAIKRIEAGTQTMTVYKPITKLANDAAEIAVQL--GKGETPKSNATLNNG---KKDVP 301

Query: 306 SVFLKPIAITKDNL-GTVIDAGWIKK 330
           S  L PI + K+N+  TV+  G+ KK
Sbjct: 302 SYLLTPIPVDKNNIESTVVADGFHKK 327