Pairwise Alignments

Query, 346 a.a., xylose ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 355 a.a., multiple monosaccharide ABC transporter substrate-binding protein from Pseudomonas sp. BP01

 Score =  140 bits (353), Expect = 5e-38
 Identities = 110/355 (30%), Positives = 175/355 (49%), Gaps = 27/355 (7%)

Query: 1   MNSFAKLLAGTAVLVSLHTAAIAADL---VVGVSWSNFQEERWKTDEAAIKAALDKAGAK 57
           MN F KL A   V V++   +   +    ++G+S  +  E RW +D  ++  AL K G K
Sbjct: 1   MNKFMKLAASLCVAVAVIGCSKKEENTKGLIGISMPSKAEARWTSDGQSMVDALTKLGYK 60

Query: 58  YISADAQSSAAKQLTDVESLISQGANALIILAQDSDAIGPAVEKAVAEGIPVVGYDRLIE 117
                AQ   + QL+ +E+L+ +G   LII   D   +   + +A  +GI V+ YDRLI 
Sbjct: 61  TDIQYAQYEVSTQLSQLENLLVKGVKGLIIAPIDGTTMTDLLRQAKEKGITVISYDRLIR 120

Query: 118 NKNAF--YITFDNKEVGRLQAAEVFKVKP--EG----NYVFIKGSSSDPNADFLFAGQQE 169
           N   F  Y TFDN + G LQ   +       EG    N+    GS+ D NA  ++AG   
Sbjct: 121 NSKDFDYYATFDNYKTGVLQGESIVSALKLNEGTGPFNFEIFAGSTDDNNAHVVYAGVMS 180

Query: 170 VLKAAMSSGKI------KNVGEAYTDGWKPENAQKNMEQFLTKNNNK--VDAVVASNDGT 221
           VL+  + SGK+        + +  T  W    AQ  M+  L+    K  +DAV+A ND  
Sbjct: 181 VLQPYIDSGKLVIRSGQVKLDQVATLNWDGALAQSRMDNILSAFYGKAHLDAVLAMNDQL 240

Query: 222 AGGAIAALAAQGM---AGSVP-VSGQDADFAALNRVALGTQTVSVWKDSRELGKEAAGIA 277
           A G +++L   G      S+P V+GQDA+  ++  +  G Q  +V+KD+R L  EAA + 
Sbjct: 241 AVGVVSSLRGVGYGSGGNSMPIVTGQDAEIPSVKAIIRGDQHSTVFKDTRALA-EAAAVM 299

Query: 278 LALAGGKKMTEIKGVTAFDGGPKKVTMQSVFLKPIAI-TKDNLGTVIDAGWIKKE 331
           +  +   K  ++   T+++ G   V  Q   L P+++  KD    ++D+G+  K+
Sbjct: 300 MDSSLQGKDVQVNDTTSYNNGSMVVPTQ--LLSPVSVEAKDVQKVLVDSGYYSKD 352